Gene Pars_2167 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_2167 
Symbol 
ID5055592 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1939136 
End bp1939771 
Gene Length636 bp 
Protein Length211 aa 
Translation table11 
GC content55% 
IMG OID640469719 
Productsuperoxide dismutase 
Protein accessionYP_001154365 
Protein GI145592363 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0605] Superoxide dismutase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATCAA CGAAAAGGTA TACCCTACCA CAACTCCCAT ACGCCTACAA CGCCCTAGAG 
CCGTACATTG CCGAGGAGAT TATGAGACTT CACCACCAGA AGCACCACCA GGGCTATGTA
AACGGGGCGA ACGCCGCCTT GGAGAAGCTG GAGAAGTTCA GGAAGGGCGA GGCGCAGATC
GACATTAGGG CGGTGCTGAG GGATCTCTCC TTCCACCTAA ACGGTCACAT ACTGCACTCC
ATCTTCTGGC CCAACATGGC GCCGCCGGGA AAGGGCGGCG GCAAGCCGGG AGGGAGGACC
GCCGACTTGA TAAACAAGTT CTTCGGCTCC TTCGAAAAGT TCAAGGAGGA GTTCTCCCAA
GCGGCGAAAA ACGTTGAGGG TGTCGGCTGG GCCATATTGG TGTACGAACC TCTCGAAGAG
CAACTCCTAG TACTCCAGGT GGAGAAGCAC AACCTAATGC ACGCCGCAGA CGCCCAGGCG
CTACTTGTGT TAGATGTCTG GGAGCACGCC TACTACCTAC AGTACAAAAA CGACAGGGGG
AGCTACGTAG ATAACTGGTG GAATGTGGTG AACTGGGACG ACGTGGAGCG CCGGCTAGAA
AAAGCGCTGA ACGGCCAGAT AGCGTTGAAA ATATAG
 
Protein sequence
MASTKRYTLP QLPYAYNALE PYIAEEIMRL HHQKHHQGYV NGANAALEKL EKFRKGEAQI 
DIRAVLRDLS FHLNGHILHS IFWPNMAPPG KGGGKPGGRT ADLINKFFGS FEKFKEEFSQ
AAKNVEGVGW AILVYEPLEE QLLVLQVEKH NLMHAADAQA LLVLDVWEHA YYLQYKNDRG
SYVDNWWNVV NWDDVERRLE KALNGQIALK I