| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pars_2089 |
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| Symbol | |
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| ID | 5056299 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pyrobaculum arsenaticum DSM 13514 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009376 |
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| Strand | - |
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| Start bp | 1865120 |
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| End bp | 1866454 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640469639 |
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| Product | D-lactate dehydrogenase (cytochrome) |
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| Protein accession | YP_001154287 |
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| Protein GI | 145592285 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0277] FAD/FMN-containing dehydrogenases |
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| TIGRFAM ID | [TIGR00387] glycolate oxidase, subunit GlcD |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 0.491336 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATGTGG GTTTTCTCAG GAAGACGTTT GGCGATAGGT TTGTTGAAGA TTCTTCCGTT
GCGGCGTTGT ACGTCCACGA CGCCTCTTTT GTGGAGGGGG AAAGCAACGT GCTGGGGGTG
GTCTTCCCCG AGACGGAGGG GGAGGTGGTT GAGCTGGTTA GGTGGGCTAT AAAGCATAAG
GTGCCGTTGT TCCCACAAGG GAGTGCCACC AGCCTCTCGG GCAACGCCGC GGCTACTGCT
AGAGGGCTCG TGGTGAGTTT TGAGAGGATG ACCAAAGTGG AGATAGACCC AGGGGACGGC
GTGGCTGTGG TCGGCCCCGG GGTGAGGATC GAGGAGCTGA ACGTCGAGCT GGCCCGGTAC
GGCTTCTTCT TCCCCGTCGA TCCCGGCTCT GTGAGGAGCG CCACGATTGG CGGGGCTATC
GCCAACGGAG CCGGCGGGAT GAGGGGGGCG AAGTACGGCA CAATAAAGGA CTGGGTGTTG
GGACTGAGAG TGGTGACGGG AAGAGGCGAC GTGTTGAAGG TGGGTTGCAA GACGTTCAAG
TGCCGGAACG GCTATGATCT TGTGAGGCTA TTTGTCGGTA GCGAGGGGAC GCTGGGCCTT
ATTACGGAGG CTGTTTTGAA GCTGGCTCCT GTGCCGGAGT CCGCCGTGGC CGTCTTGGCG
TATTATGACG ACGTGGAGCC GCTTGTAGAG GACGTGGTTA GGGTTAGGGC AAGCAGAATT
TGGCCGCTAT TTGCAGAGTT TTTAGACGCG CCGACTGCCG CCGTGGTGGG GCTTGAGGAG
AGAGACACCC TCTTTCTTGG CGTCGACGTC AATACAGGTG CAGAGGAGAG AGTTTTGAAG
AGACTCCAGT CTATCGTCAG GGGGAGAGTG GCCAGTGTGG CAGTGGGCTG GTCTGAAGCC
ATGAAGCTAC TGGAGCCGCG CAGGAGGCTA TACTCGGCGC AGGTTCACCT CGCTCAGAGA
GGCGGCGGCG TGTTGGTAAT TGAGGACGTT GCGGTGCCCA TTTCGAAGCT CCCAGACGCC
GTGAGGGGGC TTAAAAAGCT GGCGGAGAAA TACGGCGTAC CGCTGTTGCT AGGCGGCCAT
GTAGGCGACG GCAACTTACA CCCAGCTACT TGGTTTAGAA AAGAGGAGGG GCCCGGAAAG
GCGGAAAAGT TTATCAGAGA AATGGCGGAG CTCGTGGTTG GGCTAGGCGG TACAGTGTCG
GCAGAGCACG GGGTCGGGAC CTTGAAGAAA GATCTCATAG CGCTTGAGCT CGGCGATGCG
GTGCTTACAT ATATGAGGGA GCTTAAGAAG GTCTTCGACC CCTACAATAT CCTCAACCCC
GGCAAGATAG CCTAG
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| Protein sequence | MDVGFLRKTF GDRFVEDSSV AALYVHDASF VEGESNVLGV VFPETEGEVV ELVRWAIKHK
VPLFPQGSAT SLSGNAAATA RGLVVSFERM TKVEIDPGDG VAVVGPGVRI EELNVELARY
GFFFPVDPGS VRSATIGGAI ANGAGGMRGA KYGTIKDWVL GLRVVTGRGD VLKVGCKTFK
CRNGYDLVRL FVGSEGTLGL ITEAVLKLAP VPESAVAVLA YYDDVEPLVE DVVRVRASRI
WPLFAEFLDA PTAAVVGLEE RDTLFLGVDV NTGAEERVLK RLQSIVRGRV ASVAVGWSEA
MKLLEPRRRL YSAQVHLAQR GGGVLVIEDV AVPISKLPDA VRGLKKLAEK YGVPLLLGGH
VGDGNLHPAT WFRKEEGPGK AEKFIREMAE LVVGLGGTVS AEHGVGTLKK DLIALELGDA
VLTYMRELKK VFDPYNILNP GKIA
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