Gene Pars_1952 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1952 
Symbol 
ID5054720 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1751525 
End bp1752265 
Gene Length741 bp 
Protein Length246 aa 
Translation table11 
GC content57% 
IMG OID640469498 
Productstationary-phase survival protein SurE 
Protein accessionYP_001154151 
Protein GI145592149 
COG category[R] General function prediction only 
COG ID[COG0496] Predicted acid phosphatase 
TIGRFAM ID[TIGR00087] 5'/3'-nucleotidase SurE 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGTAACAA ATGACGATGG TCCCGATACG CCTTTTTTAA GGCCATTTGT GGAGGCGGTG 
AAGTCGCTGG GCTACGACGT AGTGGTTGTG ATACCTGAGA GGCCCAGATC AGCCGCGGGG
CTGGCGAGAA CTTATCACAA GCCGCTGAGG GTGCGGAGGC AGGGTGATTA CTACCTGGTC
AACGGCTATC CCGCAGACGC CGTATTTATG GCATTGAAGC TAATTGCGCC AGATGCCGGG
CTTGTCATAT CGGGAGTCAA CGTTGGGGAG AACATAGGGC TTGAAGCGAC GTATGGAAGC
GGAACTGTTG GCGCCGCTCT GCAGGCCGGC ATTCTGGGAG TCCCCGCCGT CGCGATGTCC
ATGGAGGTTG GCGGCGATGT TGGGCTGATG AGAAGAGTCG TTGAGGCGCT TTTGAGGTCG
CTAAACGGGG CACTACAAGG CGTTCTGGCA GTTAGTATAA ATATCCCAAG GGACTGGGGC
GGCGGGGTTT ACTGCGCCAG GAAGTTGGCG AGAGGTGTGT ACAACGAGAG GCTTTACGAT
GGTGTCGATC CGCGGGGGGA GAAGTTCTAC TGGAGGTGGG GGCCTAGGAG GGAGGTCTTC
GAAGAGGGGA CAGATGCGTA CTACTTCTAC GGGCTAAGAG GTATCACGGT GCTGGGGATA
GGGGAGTCGG GCATTGTGTC TGCGGGGAGG CTGGGACGGA GTCTTGGTGC TCTGATAGGG
GCAAAGATAA TAAGTTGCTA G
 
Protein sequence
MVTNDDGPDT PFLRPFVEAV KSLGYDVVVV IPERPRSAAG LARTYHKPLR VRRQGDYYLV 
NGYPADAVFM ALKLIAPDAG LVISGVNVGE NIGLEATYGS GTVGAALQAG ILGVPAVAMS
MEVGGDVGLM RRVVEALLRS LNGALQGVLA VSINIPRDWG GGVYCARKLA RGVYNERLYD
GVDPRGEKFY WRWGPRREVF EEGTDAYYFY GLRGITVLGI GESGIVSAGR LGRSLGALIG
AKIISC