Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1763 |
Symbol | |
ID | 5055296 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | + |
Start bp | 1581779 |
End bp | 1582543 |
Gene Length | 765 bp |
Protein Length | 254 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640469306 |
Product | ABC transporter related |
Protein accession | YP_001153966 |
Protein GI | 145591964 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0411] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0241378 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.00146428 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGACAATTC TCCAGATAAG GGGCATTGTA AAACAATTTG GAGCTTTCAG GGCATTAGAC GGTGTAGATA TTACAGTAGA ACGTGGCAAA GTGACGCTGA TAATAGGCCC CAATGGATCT GGCAAAACCA CGTTAGTGAA CGTAATAACT GGAGTGTACA GGCCAGAGGC CGGCAAAGTA TTTTACGTGA AGAAAGATGG GAAAAGTGTC GACATAACGG GCTGGCCGCC GCACAAGGTA TTCGAAGAGG GGGTAGTCAG GACTTTCCAA ATACCGCAGG TATTTCAAAA ACTCACAGTA CTAGAAAATT TGCTCGCAGT GGCTAGAGGG CAGAGAGGTG AGGGGGTAAT ATCTGCGCTG TTGAAAAACT GGGTACGCGA AGAGGAGGAA AACGCGAAGA GGGCGTTTCA GATCTTGAAG GCTGTAAAAC TTGCTGATAA GTGGGATACG CCGGCCTATC TCCTGTCGGC TGGCGAAATG AAGTTGTTGG AGCTTGCCAG GGCGTTGATG GCAGGCGCCG ACTTGATAAT ACTAGACGAG CCTATAGCCG GCGTCCCCAT CGATCAAGCC CACGAAGTCT TTAAGATAGT CAGAGAAATA AACCAGCGGG GCACTTCGTT CCTAGTAATA GAGCACCGCA TCGACATAGC GTTCAGATAT GTAGACTACG TCTACGCAAT GGCAAGCGGG AGGGTTATCG CCCAAGGACT CCCTGAGGAG GTGGCCAACA ACCCCAGAGT AAAGGAGGTA TACATCGGGG GATAA
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Protein sequence | MTILQIRGIV KQFGAFRALD GVDITVERGK VTLIIGPNGS GKTTLVNVIT GVYRPEAGKV FYVKKDGKSV DITGWPPHKV FEEGVVRTFQ IPQVFQKLTV LENLLAVARG QRGEGVISAL LKNWVREEEE NAKRAFQILK AVKLADKWDT PAYLLSAGEM KLLELARALM AGADLIILDE PIAGVPIDQA HEVFKIVREI NQRGTSFLVI EHRIDIAFRY VDYVYAMASG RVIAQGLPEE VANNPRVKEV YIGG
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