Gene Pars_1664 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_1664 
Symbol 
ID5054363 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp1502386 
End bp1502823 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content53% 
IMG OID640469205 
Producthistidine triad (HIT) protein 
Protein accessionYP_001153867 
Protein GI145591865 
COG category[F] Nucleotide transport and metabolism
[G] Carbohydrate transport and metabolism
[R] General function prediction only 
COG ID[COG0537] Diadenosine tetraphosphate (Ap4A) hydrolase and other HIT family hydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.147901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCTTTTT CTTCGGCATT TATGCACTGC ATATTCTGTA GCATAGTCAA GGGGGAGGCT 
CCCGCTTGGA AGGTATACGA GGACGACGAG TTTGTCGTAA TACTGGACAA GTACCCGGCG
TCTTACGGCC ACCTCCTCGT AGTGTCTAAA AAACACTTCA CAAACGTCCT CGACGCGCCT
GTAGAGCTTG TAGCTAAGGG ATTTGAAATA GCGACGCGGC TTGCCAAGGC GTGGGCTAAG
CTCGGCGCTG GCGGGGTTAA CATTGTCACC AACGCAGGAC GCGAGGCAGG CCAGATGGTA
TTCCACATGC ATATACACGT AATACCTAGG TGGGGCGGCG AGTTGCGGTG GCACGGCAAG
GAGGAGTTGA GGGATGAAGT GGCTAGAGAG GTTGTGGAGA GGCTGAGGCC CATAATACCG
GAATATTTCA GTAAATAG
 
Protein sequence
MPFSSAFMHC IFCSIVKGEA PAWKVYEDDE FVVILDKYPA SYGHLLVVSK KHFTNVLDAP 
VELVAKGFEI ATRLAKAWAK LGAGGVNIVT NAGREAGQMV FHMHIHVIPR WGGELRWHGK
EELRDEVARE VVERLRPIIP EYFSK