Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pars_1524 |
Symbol | |
ID | 5054083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pyrobaculum arsenaticum DSM 13514 |
Kingdom | Archaea |
Replicon accession | NC_009376 |
Strand | - |
Start bp | 1383374 |
End bp | 1384438 |
Gene Length | 1065 bp |
Protein Length | 354 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640469065 |
Product | major facilitator transporter |
Protein accession | YP_001153730 |
Protein GI | 145591728 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.38221 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 40 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGATAAACC TAGCAACTCT TCTTTTTTTC ACAGCCAACG GAATCGCCGT AGTGGCAATA CCGCCGTATT TAAGAGACCT CGGCGTGAGG AGCGAGTCGG TAATAGGCGC CATTGTGTCA ACGGCGTTTT TCGTGTCAAT AATAATGCGG CCCGTCAGCG GGGTGCTAGG CGACAGGATA GGCTACATAA CCCTCATGAG GGCAGGAGTG GCCTCGGCGG TGGCCGCCCA GGCCATGTAC CTAGTGGGCG ACCCGTTTTG GGTACAAGTG GGGAGGCTAT TCCACGGCCT CGCAATAGCC ACCTTCCTCC CAATGTCAGT AGCCGCCTCA GTTGCCGAGG GCCCCAAGGC GATGGCCGCC CGGTCTCTGG CAGTGGGCGT GGGCAACGTC CTTGGCCCCC TCCTCGGTAG CGCTTTATAC GACATAGGAG GCGCGCGCCT CTCCTTCATC ACAGCCCTCG GGCTCCACGC CTCCAACTTT GCCCTGGTAA GAGGCGGCGA CAAGACGCGT AGCCCCGGAG AGCCGGGCAC GGGCATAGAG AGGCGGGTAT TCCTATTCAT GGCACTACTA TCGCTCTACG GCGCCGCTTA TATGGGCATC TCCACCTTCA TCCCAGTAAA ACTCAGAGAC AACAACCTCC CCATAGCCTA CTGGGGCCTC TTCTCATCCT CCGCCGCCTT GGTGAGCCTC TTGCCTAGGG CTTTCCTATT GAAGAAAGGC CTCGTGACGC CAACAACCGC CGGAGCCGCC ACGGCGGTTG CGGCCCTGGG GATGGCCGCA GCGACCTTTG CAGATGGGCC ACTCCTCTTC GTAGCCGCCG GGGCCATATA CGGCCTGGGA CAAGGCGCCG TGGTTGTCAC ATACCAGATA CTGGCACTAG CCGGGAGCAA GAGGGCGGGG GTAAGCAGCT CTGTGTACAC AATGGGCTGG GACGTCGGAT CCATAATAGG CCCCGTCCTC GGCGGCTGGC TCGTGGAGAA CTTCGGCCTA GCCGCGTTGC ACTACACCCC CCTCCTCCTG GCGGCGAACG TCGCAGTGCT GTTTTTATAC GCAAGACGTA AGTAA
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Protein sequence | MINLATLLFF TANGIAVVAI PPYLRDLGVR SESVIGAIVS TAFFVSIIMR PVSGVLGDRI GYITLMRAGV ASAVAAQAMY LVGDPFWVQV GRLFHGLAIA TFLPMSVAAS VAEGPKAMAA RSLAVGVGNV LGPLLGSALY DIGGARLSFI TALGLHASNF ALVRGGDKTR SPGEPGTGIE RRVFLFMALL SLYGAAYMGI STFIPVKLRD NNLPIAYWGL FSSSAALVSL LPRAFLLKKG LVTPTTAGAA TAVAALGMAA ATFADGPLLF VAAGAIYGLG QGAVVVTYQI LALAGSKRAG VSSSVYTMGW DVGSIIGPVL GGWLVENFGL AALHYTPLLL AANVAVLFLY ARRK
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