Gene Pars_0959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0959 
Symbol 
ID5055340 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp850481 
End bp851476 
Gene Length996 bp 
Protein Length331 aa 
Translation table11 
GC content60% 
IMG OID640468515 
Productthreonine synthase 
Protein accessionYP_001153191 
Protein GI145591189 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0498] Threonine synthase 
TIGRFAM ID[TIGR00260] threonine synthase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.0152595 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTGGCGCT ACGCCTCTAT GCTCCCGCTT AAAAAAGGCA TAACTCTTGG CGAAGGCGCT 
ACCCCCCTTG TCAAGTCCAA CTTAGCAGAA GGTCTATACG TCAAGTTCGA GGGGGCTAAC
CCCACCGGCA GTTTTAAGGA TCGGGGCATG GCGCTCGGAG TCACAGTGGC AAAGGAGAGC
GGCGCAAACA AAATACTCGT CGCTTCGACC GGCAATACGG CCGCGTCCGC CGCAGCCTAC
GCCGCCAGGG CGGGGATGAG GTGTTACGTA GTGCTCCCCA GGGGCAACGT GGCAAGGGGG
AAGCTAATGC AAGCCGCCCT CCACGGGGCG GAGATCGTGA TGATCAACGG CCTCTTCGAC
AAGGCCCTCG AATACGTGGT AAACTACGGC ACTAAGTACG CCTACCCCCT AAACAGCTTC
AACCCCTGGC GCCTCGAGGG GCAGAAGACT GTGGCTTTTG AAATATTCGA GGAGCTCGGT
TGCCCCGACT ACGTGGTTGT GCCGGTAGGC AACGCCGGAA ATATCTCGGC CATCTGGAAG
GGGTTTAAAG AACTGGCGGA GCTGGGCTTG TGCAACAAGC TTCCGCGGAT GGTGGGCGTG
CAGGCAGAGG GCGCCGCCCC GCTTGCCGAG GCGTGGGAGA GGGGGCTGGA GGAGCCCCTA
TTCGTCGACG AGCCGAGGAC GGTGGCGACT GCGATAAAGA TCGGGAGACC TATAAACTGG
CCCAAGGCAG TTAGGGCCGT GAAGGAGTCA GGCGGCTTCT TTATCAAGGT CCAAGACGGC
GAAATCTTAA AGGCGCAACG AGAGCTAGCG CAGAGAGACG GAATAGGCGC CGAGCCCGCC
GGGGCGGCCT CGGTTGCAGG TTTTTTAAAG GCCAAGTTGA GGGGAGTCGT GGTCGCCGTG
GTGACGGGCC ACGCCCTAAA GGACCCCGAC GCGGTGGAGA TATCGGCAAA GGAAGTTAGG
AACGCCGACG AGCTGATGGA GCTGTTGGAG AAATGA
 
Protein sequence
MWRYASMLPL KKGITLGEGA TPLVKSNLAE GLYVKFEGAN PTGSFKDRGM ALGVTVAKES 
GANKILVAST GNTAASAAAY AARAGMRCYV VLPRGNVARG KLMQAALHGA EIVMINGLFD
KALEYVVNYG TKYAYPLNSF NPWRLEGQKT VAFEIFEELG CPDYVVVPVG NAGNISAIWK
GFKELAELGL CNKLPRMVGV QAEGAAPLAE AWERGLEEPL FVDEPRTVAT AIKIGRPINW
PKAVRAVKES GGFFIKVQDG EILKAQRELA QRDGIGAEPA GAASVAGFLK AKLRGVVVAV
VTGHALKDPD AVEISAKEVR NADELMELLE K