Gene Pars_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPars_0226 
Symbol 
ID5055118 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePyrobaculum arsenaticum DSM 13514 
KingdomArchaea 
Replicon accessionNC_009376 
Strand
Start bp203392 
End bp204195 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content60% 
IMG OID640467805 
Productputative circadian clock protein, KaiC 
Protein accessionYP_001152493 
Protein GI145590491 
COG category[T] Signal transduction mechanisms 
COG ID[COG0467] RecA-superfamily ATPases implicated in signal transduction 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.728159 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.358869 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAAGAGGG TCTCCACCGG GGTGGAGGAG CTGGACAGGG CGCTTGAAGG CGGCATACCG 
CAGGGGAGCT GGGTGGTGGT GACTGGGGAG CCCGGCGTTG GGAAGTCCAT ATTGTGTATG
CACTTCGCCT ACGCTGGGCT TAGGTCCGGT GATCCGGTTG TCTACGTCAC TACGGAGCAG
GAGTTCCGCG ACGTCATGGA GCAGGCGAGG CAGCTGGGCA TGGACTTCTC GAAGTTCTCC
GCCTACAACA TAGCGTGGAG GAAGGAGCCT GAGGAGCTCC CGGAGATTGT CGTCATCGAC
ATCTTCGGCT TGTTGAAGGT GGCGCGGCAG CTGACCGAAA AGGCTAAGGA GGAGAGCCCC
GAGAAGGTGA GGCGCTACGC CGCGTTGTCC ATAGACACGT TGATCGAGGC GATAAACGAG
GCCTACGACC TCCTCGCAGT GGCCAAGGAG AGGGGTACTC CCGAGAGGCA CGTCCGCCTG
GTGATAGACT CCATGTCCGC CTTCTGGGTG GACAAGCCCG TCATGGCCAG GAAGTACTCC
TACCAGCTTA AGATCGCCAC GCATAGGGAG AACGTCACCG CGCTTCTCAC AAGCCAGTAC
GCCCCGACGA CGAGGCAGGC ATTCGGCTTC GGCCTAGAGC ACATCGCAGA CGGCGTGATA
CACATGTGGA TGGACGACGT CGAGTCGGCA AAGGAGGTGA GGAGGTGGCT GATAGTGAAG
AAGATGCGGA TGACGAACCA CGCCACAAGG GCTTACAGAG TGAGAATAGA GCCCAGCCGG
GGGATTGTCC TGGAGCCTGC CTAG
 
Protein sequence
MKRVSTGVEE LDRALEGGIP QGSWVVVTGE PGVGKSILCM HFAYAGLRSG DPVVYVTTEQ 
EFRDVMEQAR QLGMDFSKFS AYNIAWRKEP EELPEIVVID IFGLLKVARQ LTEKAKEESP
EKVRRYAALS IDTLIEAINE AYDLLAVAKE RGTPERHVRL VIDSMSAFWV DKPVMARKYS
YQLKIATHRE NVTALLTSQY APTTRQAFGF GLEHIADGVI HMWMDDVESA KEVRRWLIVK
KMRMTNHATR AYRVRIEPSR GIVLEPA