Gene Paes_1537 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1537 
Symbol 
ID6460564 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1678831 
End bp1679676 
Gene Length846 bp 
Protein Length281 aa 
Translation table11 
GC content48% 
IMG OID642725527 
Productcytochrome c assembly protein 
Protein accessionYP_002016204 
Protein GI194334344 
COG category[R] General function prediction only 
COG ID[COG4137] ABC-type uncharacterized transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000307971 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00260082 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCAACAAA GCGTTCTCAA TAATACCCTG CTGATTCTAC TGACCCAGGC GGTCTCACTG 
CTCTATGTCA TCACCACGGG GTTATACGGT GCGGATTTCT TCAAAAACAT CAAACAGGCC
AAGGCATACA AACAGCCTGC GCTGATTGTC ACGATCGTTG CCCATATTGC GTTTCTCGGC
TTTCTGACCG CGCCGGCAGG ATATCAGCTG AGCTATTCAA GCTATACCGT CATGAGTATG
GTCGCCCTGA CGCTGGCGGT AATCTATATG TTTATCGAGT TTACCACCAA AACAGACAAA
ACAGGATTTT TCGTACTCTC CTTTTCTGCA GGAACTGAAA TACTCTCATC GATTCTCCTG
TCGCTTTCAT CGAGCCAGGG TCCCTCGTTC TCCGGCATCG GTATAGGAAT CCACCTTTTC
TCAGCCATTT TCGGTTTCAG TGCAATAGCC ATCGCAGGCC TTTACAGCTT CCTCTATCTT
CTGCTGTTCC GTCAGATCGA AAACAATCAC TACGGCATAC TGTTTGAAAA TCTGCCGAAC
CTCGAGGTGC TTGAGCAACT CATCAAACAT GCCGTCGCAT TCGGATTCCT TTTTCTCAGC
CTCACCCTAG TGGGAGGTAT CGTCGGCTCT GCCCAAAGCA ACGAAGCAAT CAACCTGCTC
GACCCGAAAC TTATCGCACT CATTGTCATC TGGATGCTCT ACGGCGCAAG TCTCTTTATC
AAAAAGCTTT TTGGCTGGGA TACCAAGCAC ATGGCTTATC TTCTGATTAT CCTCTTTGTC
TTTATAACGA GCCTGATTGT GATGATGAGC CTCTTCTCTC CCACATTCCA CAATCTCAGC
TTTTAA
 
Protein sequence
MQQSVLNNTL LILLTQAVSL LYVITTGLYG ADFFKNIKQA KAYKQPALIV TIVAHIAFLG 
FLTAPAGYQL SYSSYTVMSM VALTLAVIYM FIEFTTKTDK TGFFVLSFSA GTEILSSILL
SLSSSQGPSF SGIGIGIHLF SAIFGFSAIA IAGLYSFLYL LLFRQIENNH YGILFENLPN
LEVLEQLIKH AVAFGFLFLS LTLVGGIVGS AQSNEAINLL DPKLIALIVI WMLYGASLFI
KKLFGWDTKH MAYLLIILFV FITSLIVMMS LFSPTFHNLS F