Gene Paes_1201 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPaes_1201 
Symbol 
ID6460208 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProsthecochloris aestuarii DSM 271 
KingdomBacteria 
Replicon accessionNC_011059 
Strand
Start bp1307179 
End bp1308333 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content50% 
IMG OID642725192 
ProductSufBD protein 
Protein accessionYP_002015877 
Protein GI194334017 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0719] ABC-type transport system involved in Fe-S cluster assembly, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.32638 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0470054 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGTAG ATCTGTCGAA ATACGAATTT ACCGGGCACA ACAGTCCGGA AGTCGAAGAC 
CTGACCCGAC TGGATAACAA TGAAAAGAAA AGCATGAGAA TGGCCGGGTT CGATGCCAAC
GAGCAAAACC GAAGCGCATC GTTTGTTCAG ATCGATCACA ACCATGCCTT CTGCAAGTCG
TACGATCCCG GGGTTGAAAT ACTGCCCATA GGGCTTGCCA TGAAAATCCA CGAAGGCCTT
GCCGACTATC AATGGAAACT GCTCAAACCG GGAAAAGACG AATTTACAAG AATGGCATCA
GACAATCCGC ATGGCGGATA TGTCATAAGG GTTAAAAAAG GAGCCCGCCT CAACAACCCC
ATCCAGTCAT GCCTGATGAT GCATGCAGAA GATGTCGGCC AGAACGTACA CAACATCATT
ATCATTGAAG AAGGCGCTGA AGCACATATC CTCTCAGGCT GCACGACCTC TCAGGCAGAT
CAGTCCGCCG CACATATTGG TATATCGGAA TATTACATTG AAAAAAACGC CCGTCTCACC
TTCACCATGG TCCATAACTG GGGCGAACAT GTCGAAGTGA GGCCCCGATC TGCAGGAGAG
GTTGATGCGG GAGGCGTTTT TCTCAGTAAC TATATCAGTC TCAAACCGGT TAAAAACCTT
CAGATGTACC CGTCAGTCGC CATGAAAGGT GCAGGTTCAG TCTCGCGGTT CAACTCTATC
ATCGTCGCCA CTGAAGGGAG CTTTATGGAT GTAGGCAACA AGGTCATTCT CGATGCGCCG
GAGACTCGCA CTGAAATAAT CTCCCATGCT ATAGCATCCG GAGGGCACAT TATCGCACGC
GGCCACATAC AGGCAAACTG TGCGCCATCG AAAGGACATC TTGAGTGCCA GGGACTGCTC
CTCAAAAACG GAATCATTCA GGCAATTCCT GAACTCGACG GTCGGGCCGA AGGCGTTGAA
CTCTCGCACG AAGCCGCCGT TGGCAAACTC GCAAAAGAAG AACTCGAGTA TCTGATGATA
AGAGGCCTGG ATGAACAGGC CGCCGGGTCG GCTATCATTC GGGGATTTCT GAATATCGAT
ATCATGGGAC TCCCTTCCGA ATTGCAATCA GAAATTGACA AAGCCATCGC TGAAACAGAA
AAAAGCATGT TCTAA
 
Protein sequence
MKVDLSKYEF TGHNSPEVED LTRLDNNEKK SMRMAGFDAN EQNRSASFVQ IDHNHAFCKS 
YDPGVEILPI GLAMKIHEGL ADYQWKLLKP GKDEFTRMAS DNPHGGYVIR VKKGARLNNP
IQSCLMMHAE DVGQNVHNII IIEEGAEAHI LSGCTTSQAD QSAAHIGISE YYIEKNARLT
FTMVHNWGEH VEVRPRSAGE VDAGGVFLSN YISLKPVKNL QMYPSVAMKG AGSVSRFNSI
IVATEGSFMD VGNKVILDAP ETRTEIISHA IASGGHIIAR GHIQANCAPS KGHLECQGLL
LKNGIIQAIP ELDGRAEGVE LSHEAAVGKL AKEELEYLMI RGLDEQAAGS AIIRGFLNID
IMGLPSELQS EIDKAIAETE KSMF