Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04712 |
Symbol | |
ID | 6304860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 1339346 |
End bp | 1340356 |
Gene Length | 1011 bp |
Protein Length | 336 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 642638633 |
Product | Rhs element Vgr protein |
Protein accession | YP_001912510 |
Protein GI | 188575581 |
COG category | [S] Function unknown |
COG ID | [COG4253] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCAACTTG CGACCACCCA GGCAGCCACG CAACTGAACC TGGGGCACCT GATCCACCAG GCCGACAACT ACCGCGGCAG CTTCCGCGGG GAAGGCTTCG AACTGCGCAC CGACGCGTGG GGCGCGGTGC GGGCCAGCTC GGGGCTATGG CTGAGCAGCT ACGGCCGCAG CGGCGGCCCG GCCGGCGAGG CGACCCAGCC CAGCGCATTG CTGAGCCAGC TGCAGACGCT GGGCAAGACG TTCTCGCAGG CGGCGGGCAC GCACCAGACG GTGAAGCTGG CCGCGCACGA AGGCGTGGGC CAGGCGAACC ACTCCCAGCT GATCGCCGAG CAGGCGCCGC TGCCGGCGCT GCTGACCAGC GTGAAGACCA CGGTGCCGGG CACGGCCTAC GCCGACGCCA AGGGCGCGGC GGCCGAGCGC CGCGCCAGCC CGGGCGACGA CCGGGTGCCG CACACCGGCG ATGCGCTGCT GGGCCTGGCG GCGCCAGCGG GGATCGGCGT GGTGGCCGGC CAGGGCCTGA GCTGGAGCGT GGGCGAGACG CTGACGCTGG CCAGCGGCGC GGGCAGCGAA GCGGCCATCG CCGGCGACGC CCGGCTGCAC AGCGGCCAGG CAATCGGCGT GCTGGCCGCG GCGGTGGACG GCCGGCAAAC GCAAGCCAAC AGCCTGAGCC TGGTCAGCGG CGAAGGCGCG CTGGACGTGC AGGCGCAGTC GGACGACGTG CGCGTACAGT CGAAAGAAGG CCTGAAGCTG ATCAGCGCCA ACGCCGACGT GGCCCTGGCG GCGGGCAAGA CCCTCCACCT GGCGGTGGCC GGCGGGGCCA GCGTGACCAT CGAAGGCGGC AACATCACCG TCGCCTGCCC CGGCACCATC ACCGTGCATG CGAGCAAGAA GTCGTTCGTG GGGCCAACGA CGCTGAACCG GTCGTTTGTC GCTTGGCCGC AAAGCAACTT GAATGCGCCT TGCATGATGC AGGCTGCGGC GACCAATAGC GCGTTTGTGC GAGTGGACTA A
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Protein sequence | MQLATTQAAT QLNLGHLIHQ ADNYRGSFRG EGFELRTDAW GAVRASSGLW LSSYGRSGGP AGEATQPSAL LSQLQTLGKT FSQAAGTHQT VKLAAHEGVG QANHSQLIAE QAPLPALLTS VKTTVPGTAY ADAKGAAAER RASPGDDRVP HTGDALLGLA APAGIGVVAG QGLSWSVGET LTLASGAGSE AAIAGDARLH SGQAIGVLAA AVDGRQTQAN SLSLVSGEGA LDVQAQSDDV RVQSKEGLKL ISANADVALA AGKTLHLAVA GGASVTIEGG NITVACPGTI TVHASKKSFV GPTTLNRSFV AWPQSNLNAP CMMQAAATNS AFVRVD
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