Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_04233 |
Symbol | hemD |
ID | 6304287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 776457 |
End bp | 777260 |
Gene Length | 804 bp |
Protein Length | 267 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 642638065 |
Product | uroporphyrinogen-III synthase |
Protein accession | YP_001911947 |
Protein GI | 188575018 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1587] Uroporphyrinogen-III synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGCAGCGC TCTCGCATAA TCACACCATG ACCGGCCTTG CCCATCCCGA TGCTGCCTGG ACCCTGATCT CGCTGCGCCC CAGCGGCGAA CATGCGCCGC TACGGCGGGC GGTTGCGCGG CATGGCGGGC GGGTACTGGC GCTGTCGCCG TGGCGCTTGC AGACCAACGA TGCCGCACAG GCGCGGGACG CGCTGCGACA GGCGCTGGCA GCACCGATTG CGGTGTTCAC CAGCCCGGCG GCCGTGCAGG CGGCGCATCG TCTGGCGCCG CTGCAGCGCC CGGCGCAGGC GCACTGGGTG AGCGTGGGCG ATGGCACTGC GCGCGCATTG CAGGCCTGCG GCATCGACAC TGTGGTGCGC CCGACGCGCA TGGATAGCGA AGGCCTGCTT GCGCTGCCGC TGCTGCAGGC GCCGCTGCAG GCCGTTGGGC TGATCACCGC GCCCGGCGGA CGCGGCATGC TGGCACCAAC GCTGGAACAG CGCGGTGCGC GCATTGTGCG AGCCGATGTC TATCAACGCA TCCCGCTGCG CTTGCGCGCG TCGGCCATCC AGGCCTTATC GCACGCATTG CCGCGCAGCG TGCTGGCCTT GAGCAGCGCC GAGGCACTGA CGCTGGTCCT ACAACAGCTG CCTTCCGCGC TGATCGAGAA ATGGCAACGG CGGCCGGTGG TCGCGTCCAG CGATCGCATG CTGGATGCCG CGCACGCTGC TGGCTTCATC CATCGCATGC GTGCAGAAGG CCCACTGCCA AAGCAGCTTG CCGCTGCTGC GGCAGCGATC GTGACACCAC CGCGACCTTG CTGA
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Protein sequence | MAALSHNHTM TGLAHPDAAW TLISLRPSGE HAPLRRAVAR HGGRVLALSP WRLQTNDAAQ ARDALRQALA APIAVFTSPA AVQAAHRLAP LQRPAQAHWV SVGDGTARAL QACGIDTVVR PTRMDSEGLL ALPLLQAPLQ AVGLITAPGG RGMLAPTLEQ RGARIVRADV YQRIPLRLRA SAIQALSHAL PRSVLALSSA EALTLVLQQL PSALIEKWQR RPVVASSDRM LDAAHAAGFI HRMRAEGPLP KQLAAAAAAI VTPPRPC
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