Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_03863 |
Symbol | |
ID | 6303869 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | + |
Start bp | 368060 |
End bp | 368875 |
Gene Length | 816 bp |
Protein Length | 271 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642637658 |
Product | glycosyl hydrolase family 10 |
Protein accession | YP_001911543 |
Protein GI | 188574614 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGGGCAGT GTGGAAGCGA TGCGCGACCA GATGATTGGA GCACGCTGGA TGCTGCTTAC CGGTTTGCGC AGGCCAACGG CATGCCGTTC CAGATGCACG TGATGATGTG GGGCAACCAG CAGCCGGAGT GGATCAAGAG CGTGCGGGCG GTCGAACAGC GCCGCGAGAT CGCGCCATGG TTTGCCACTG TTGCGCAGCG CTACCCGGAC ATCGCGCTGC TGGAGGTAGT GAACGACCCG CTCAACGACC CGCCGAGCAA GGCCGATACC GGTGGCGGCA ATTATCTGCA GGCGCTGGGT GGCAGCGGCG ACAGTGGGTG GGAATGGGGG CTGCAGGCGT TTCGGCTTGC GCGCCAGCAT GTCCCGCACA ACAAGCGGAT GATCAACGAC TACAGCATCA CCAATAGTGC GCAGGCCACA CAGAAATATC TGCAGATCGT GCGGTTGCTG CAGCGCGAGC ACTTGGTCGA TGCCATCGGC GTGCAGAAGC ACGCCTTCGA GACCACACCG AATGTGGCGA TGTCGGTGCA TCGCGACAAT CTGGATGCGT TGGCTGCCAC CTGTTTGCCG ATCTACATCA CCGAGTTCGA TCTGGACGGG CCCACCGATA CGCAGCAGCT GGCCGACTAC CAGCGCGTGT TTCCGCTGTT CTGGGAGCGC CCGGCCATGC ATGGCATCAC CTTGTGGGGC TTTCGGCCCG GCGTGTGGCG CGACAAGGAA GCTGCCTACC TGATCCGCGC CGATGGCACC GAACGTCCCG CGCTCACGTG GCTGCGTGAC TACGTTGCAG CCCATCCCGG CACACCTACG CCATGA
|
Protein sequence | MGQCGSDARP DDWSTLDAAY RFAQANGMPF QMHVMMWGNQ QPEWIKSVRA VEQRREIAPW FATVAQRYPD IALLEVVNDP LNDPPSKADT GGGNYLQALG GSGDSGWEWG LQAFRLARQH VPHNKRMIND YSITNSAQAT QKYLQIVRLL QREHLVDAIG VQKHAFETTP NVAMSVHRDN LDALAATCLP IYITEFDLDG PTDTQQLADY QRVFPLFWER PAMHGITLWG FRPGVWRDKE AAYLIRADGT ERPALTWLRD YVAAHPGTPT P
|
| |