| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00649 |
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| Symbol | |
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| ID | 6305741 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2277424 |
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| End bp | 2278398 |
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| Gene Length | 975 bp |
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| Protein Length | 324 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642639509 |
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| Product | Putative signal protein with GGDEF domain |
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| Protein accession | YP_001913374 |
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| Protein GI | 188576445 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2199] FOG: GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.0817646 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGATCCTCC ACCTGCGGCG GGATTTCCGC CTTGGCATCG TCAAGATGCT TGGGCCAATC
ACTGCGCTGT TGCTTTGCCT CTATGCGGTG TACTTGGCCA TGACCGGTCA GGTGGTTGCT
TGCCTGGTCA CCACGTCGTT GGGTTTGCTT GCGGTATGGC GCGGCTGGCA GATGCGCAGC
GCCGAACGAA CCGGTGCCGG CGGCGTGTGG CTGGCGTCGA TCAATGTCGG CGGGTGTCTG
GTCGCGTGCT GGACCGGTGG CGATGGCGCC CTGATCTGGC TGTTCCCGGT CCTGGCCACC
AATTATTTAC TGTGCGGGCC GCGACGCGCG GTGCTGTTGA GCTTGCCACT GCTGGCCGCA
TTGCTGTTCT TGCCTGGCTT GATCACCAGC CCCGGCCAGG GCGTGTCGAC AATCGTGGGG
ACGTTGGTGA CGCTGGCGGT GGGCTATGCG TTTTCGCTAC GGATGCAGGA CGACCGCGTG
CATCTGGAAG AGCTGGCCTC GCTAGATGCG CTGACCGGCT TGCCCAATCG GCGCATGCTC
GAACGCGCGC TGACCGATCA GATCAATCAA CGCCAACCGC ATGATCGGCT CAACAGCTTG
ATCATCCTGG ATCTGGATCA TTTCAAAGAG GTCAACGATC TGTACGGGCA TGCCGCAGGC
GATGCGGCGC TCTCGGATCT GGCCACCATC CTGCGCTTCG AAGTACGCGA CCCGCATCAG
GTATTCCGCT TTGGCGGCGA AGAATTCGTG GTGCTGCTGC GGGCCGGTTC GCTGGCGGAA
CTGGAAGCGG CTACCGAACG CTTGCGCAAG GTGATCCGCA ATGGCTTGCG CGGCCCGGGC
GGGCGCATCA CCGTCTCGCT GGGTGCGGCA CGTCACGACG GCGAAACGCA TTGGCAAGAC
TGGTTTTCGC GTGCCGATGC AGCGCTGTAT CTGGCCAAGA ACGGCGGACG TGACAGCGCG
CGGGTTGCCG AGTAA
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| Protein sequence | MILHLRRDFR LGIVKMLGPI TALLLCLYAV YLAMTGQVVA CLVTTSLGLL AVWRGWQMRS
AERTGAGGVW LASINVGGCL VACWTGGDGA LIWLFPVLAT NYLLCGPRRA VLLSLPLLAA
LLFLPGLITS PGQGVSTIVG TLVTLAVGYA FSLRMQDDRV HLEELASLDA LTGLPNRRML
ERALTDQINQ RQPHDRLNSL IILDLDHFKE VNDLYGHAAG DAALSDLATI LRFEVRDPHQ
VFRFGGEEFV VLLRAGSLAE LEAATERLRK VIRNGLRGPG GRITVSLGAA RHDGETHWQD
WFSRADAALY LAKNGGRDSA RVAE
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