| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00546 |
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| Symbol | talC6a |
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| ID | 6305853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | + |
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| Start bp | 2384284 |
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| End bp | 2387193 |
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| Gene Length | 2910 bp |
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| Protein Length | 969 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642639619 |
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| Product | TAL effector AvrBs3/PthA |
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| Protein accession | YP_001913480 |
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| Protein GI | 188576551 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.1176 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGACCGCAG TGGAGGCAGT GCATGCATGG CGCAATGCAC TGACGGGTGC CCCCCTGAAC
CTGACCCCGG ACCAAGTGGT GGCCATCGCC AGCAATATTG GCGGCAACCA GGCGCTGGAG
ACGGTACAGC GGCTGTTGCC GGTGCTGTGC CAGGCCCATG GCCTGACCCC GGACCAGGTC
GTGGCCATCG CCAGCAATGG CGGCAAGCAG GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG
GTGCTGTGCC AGGACCATAG CCTGACCCCG GACCAGGTCG TGGCCATCGC CAGCAATATA
GGCGGCAAGC AGGCGCTGGA GACGGTGCAG CGGCTGTTGC CGGTGCTGTG CCAGGACCAT
GGCCTGACCC CGGACCAGGT GGTGGCCATC GCCAGCAATA GTGGCGGCAA GCAGGCGCTG
GAGACGGTGC AGCGGCTGTT GCCGGTGCTG TGCCAGGACC ATGGCCTGAC CCCGGACCAG
GTGATGACCA TCGCCAGCAA TAACGGCGGC AAGCAGGCGC TGGAGACGGT GCAACGGCTG
TTGCCGGTGC TGTGCCAGGA CCATGGCCTG ACCCCGGACC AGGTGGTGAC CATCGCCAGC
AATGGCGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG
GACCATGGCC TGACCCCGGC CCAAGTGGTG GCCATCGCCA ACAATAACGG CGGCAAGCAG
GCGCTGGAGA CGGTGCAACG GCTGTTGCCG GTGCTATGCC AGGCCCATGG CCTGACCCCG
GCCCAGGTCG TGGCCATCGC CAGCAATAGC GGCGGCAAGC AGGCGCTGGA GACGGTGCAG
CGGCTGTTGC CGGTGCTGTG CCAGGCCCAT GGCCTGACCC CGGACCAGGT GGTGGCCATC
GCCAGCAATG GCGGCAAGCA GGCGCTGGAG ACGGTGCAGC GGCTGTTGCC GGTGCTGTGC
CAGGCCCATG GCCTGACCCC GGACCAGGTG GTGGCCATCG CCAGCAATAG TGGCGGCAAG
CAGGCGCTGG AGACGGTGCA GCGGCTGTTG CCGGTGCTGT GCCAGGCCCA TGGCCTGACC
CCGGACCAGG TGGTGGCCAT CGCCAACAAT AACGGCGGCA AGCAGGCGCT GGAGACGGTG
CAGCGGCTGT TGCCGGTGCT GTGCCAGGAC CATGGCCTGA CCCCGGACCA AGTGGTGGCC
ATCGCCAGCA ATAGTGGCGG CAAGCAGGCG CTGGAGACGG TGCAGCGGCT GTTGCCGGTG
CTGTGCCAGG ACCATGGCCT GACCCCGGAC CAGGTGGTGG CCATCGCCAG CAATGGCGGC
AAGCAGGCGC TGGAGACGGT GCAGCGGCTG TTGCCGGTGC TGTGCCAGGA CCATGGCCTG
ACCCCGGACC AGGTGGTGGC CATCGCCAGC AATATTGGCG GCAAGCAGGC GCTGGAGACG
GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG GACCATGGCC TGACCCCGGA CCAGGTCGTG
GCCATCGCCA GCCATGGCGG CGGCAAGCAG GCGCTGGAGA CGGTGCAGCG GCTGTTGCCG
GTGCTGTGCC AGGACCATGG CCTGACCTCG GACCAGGTGG TGGCCATCGC CAGCCACGAT
GGCGGCAAGC AGGCGCTGGA GACGGTGCAG CGGCTGTTGC CGGTGCTGTG CCAGGACCAT
GGCCTGACCC CGGACCAGGT GGTGGCCATC GCCAGCAATA TTGGCGGCAA GCAGGCGCTG
GAGACGGTGC AGCGGCTGTT GCCGGTGCTG TGCCAGGACC ATGGCCTGAC CCTGGACCAG
GTGGTGGCCA TCGCCAGCCA CGATGGCGGC AAGCAGGCGC TGGAGACGGT GCAACGGCTG
TTGCCGGTGC TGTGCCAGGA CCATGGCATG ACCCCGGACC AGGTCGTGGC CATCGCCAGC
CACGATGGCG GCAAGCAGGC GCTGGAGACG GTGCAGCGGC TGTTGCCGGT GCTGTGCCAG
GACCATGGCC TGACCCCGGA CCAGGTCGTG GCCATCGCCA GCAATGGCGG CGGCAAGCAG
GCGCTGGAGA GCATTGTTGC CCAGTTATCT CGCCCTGATC CGGCGTTGGC CGCGTTGACC
AACGACCACC TCGTCGCCTT GGCCTGCCTC GGCGGACGTC CTGCCCTGGA TGCAGTGAAA
AAGGGATTGC CGCACGCGCC GGAATTGATC AGAAGAATCA ATCGCCGTAT TCCCGAACGC
ACGTCCCATC GCGTTGCCGA CCTCGCGCAC GTGGTTCGCG TGCTTGGTTT TTTCCAGAGC
CACTCCCACC CAGCGCAAGC ATTCGATGAC GCCATGACGC AGTTCGGGAT GAGCAGGCAC
GGGTTGGTAC AGCTCTTTCG CAGAGTGGGC GTCACCGAAC TCGAAGCCCG CTGCGGAACG
CTCCCCCCAG CCTCGCAGCG TTGGGACCGT ATCCTCCAGG CATCAGGGAT GAAAAGGGCC
AAACCGTCCC CTACTTCAGC TCAAACACCG GATCAGGCGT CTTTGCATGC ATTCGCCGAT
TCGCTGGAGC GTGACCTTGA TGCGCCCAGC CCAATGCACG AGGGAGATCA GACGCGGGCA
AGCAGCCGTA AACGGTCCCG ATCGGATCGT GCTGTCACCG GCCCCTCCAC ACAGCAATCT
TTCGAGGTGC GCGTTCCCGA ACAGCACGAT GCGCTGCATT TGCCCCTCAG CTGGAGGGTA
AAACGCCCGC GTACCAGGAT CGGGGGCGGC CTCCCGGATC CTGGTACGCC CATCGCTGCC
GACCTGGCAG CGTCCAGCAC CGTGATGTGG GAACAAGATG CGGCCCCCTT CGCAGGGGCA
GCGGATGATT TCCCGGCATT CAACGAAGAG GAGCTCGCAT GGTTGATGGA GCTATTGCCT
CAGTCAGGCT CAGTTGGAGG GACGATCTGA
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| Protein sequence | MTAVEAVHAW RNALTGAPLN LTPDQVVAIA SNIGGNQALE TVQRLLPVLC QAHGLTPDQV
VAIASNGGKQ ALETVQRLLP VLCQDHSLTP DQVVAIASNI GGKQALETVQ RLLPVLCQDH
GLTPDQVVAI ASNSGGKQAL ETVQRLLPVL CQDHGLTPDQ VMTIASNNGG KQALETVQRL
LPVLCQDHGL TPDQVVTIAS NGGGKQALET VQRLLPVLCQ DHGLTPAQVV AIANNNGGKQ
ALETVQRLLP VLCQAHGLTP AQVVAIASNS GGKQALETVQ RLLPVLCQAH GLTPDQVVAI
ASNGGKQALE TVQRLLPVLC QAHGLTPDQV VAIASNSGGK QALETVQRLL PVLCQAHGLT
PDQVVAIANN NGGKQALETV QRLLPVLCQD HGLTPDQVVA IASNSGGKQA LETVQRLLPV
LCQDHGLTPD QVVAIASNGG KQALETVQRL LPVLCQDHGL TPDQVVAIAS NIGGKQALET
VQRLLPVLCQ DHGLTPDQVV AIASHGGGKQ ALETVQRLLP VLCQDHGLTS DQVVAIASHD
GGKQALETVQ RLLPVLCQDH GLTPDQVVAI ASNIGGKQAL ETVQRLLPVL CQDHGLTLDQ
VVAIASHDGG KQALETVQRL LPVLCQDHGM TPDQVVAIAS HDGGKQALET VQRLLPVLCQ
DHGLTPDQVV AIASNGGGKQ ALESIVAQLS RPDPALAALT NDHLVALACL GGRPALDAVK
KGLPHAPELI RRINRRIPER TSHRVADLAH VVRVLGFFQS HSHPAQAFDD AMTQFGMSRH
GLVQLFRRVG VTELEARCGT LPPASQRWDR ILQASGMKRA KPSPTSAQTP DQASLHAFAD
SLERDLDAPS PMHEGDQTRA SSRKRSRSDR AVTGPSTQQS FEVRVPEQHD ALHLPLSWRV
KRPRTRIGGG LPDPGTPIAA DLAASSTVMW EQDAAPFAGA ADDFPAFNEE ELAWLMELLP
QSGSVGGTI
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