| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PXO_00376 |
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| Symbol | |
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| ID | 6305483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010717 |
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| Strand | - |
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| Start bp | 2024792 |
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| End bp | 2026600 |
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| Gene Length | 1809 bp |
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| Protein Length | 602 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642639252 |
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| Product | polygalacturonase |
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| Protein accession | YP_001913124 |
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| Protein GI | 188576195 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5434] Endopolygalacturonase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGAAGCCGC CCGATCAACA CAGCAACACC GACGCCGCGT GCGTGCGCGT CGCAGGATCA
TCGCATCACG CACACGCTGG TATCTCGCTG CCGCTCGCTG ATCTGGCACG TCTGCCGCAT
TCCACCGGAC CAACACCCAT GCAGTCCCAT CGCTTTGTTC CAACCGTCAC GCCACTGACC
CTCGCCCTGC TCGGTCTGGC TACGTTCCAC GCCAGCGCTG CACGACCGCA CGGGCAGTAC
GTACCTGATA CCGCGCACAG CATTTCCACA AGCTGGGGGG TGGTCCAGCA GCCCACATTA
CCGACCCAGG TATGCGCCAC GCTCAAGGCC GCGCTGATGC CGGTGGGCGG CTCGCTCGAT
ACGCTTGACC AGAATCCGGC AGACTCCAAA CGCGACACCG CGCGCTTGCA GGCGGCCATC
GACCATTGCC CTGCCGGCAG CGCAGTGCAC CTTGTCCCCG GCGATGCCGG CGAATCCGGG
TTGCTGACCG GGCCGCTGAC CATTAAAAGC GGTGTCACGC TATGGATCGA CGGCGGCGTC
ACCTTGTTCG GCTCGCGCAA TCCGCTGGAT TACGACAACG GCCTGGGCAC CTGCGGCACT
GCGACCAGCG ACAAGACGAA GTCATGCAAG CCGCTCATCC ACGTCGCCGA TACCGCAAAA
AGCGCGATCG TTGGTGCGGG CAAGATCGAT GGACGCGGCG GCAGCACGCT GACTGCCGGG
CCAAACGCCG GCACCGCCAG TTGGTGGGAT CTGGCCTATC TCAACGTCAC TAAAGGCCTG
AGCCAACACG TCCCGCGGCT GCTGCAGATC GACGACAGCA CTGACTTCAC GTTGTACGAC
ATCACTCTGG AAAACTCGGC GAATTTCCAT GTGACCACCG ATAACGTGGT TGGCCTGACG
GCGTGGGGCA TCAAAATTCT TGCGCCCAGC CTGGTCTACT CGCGGCCCGG CTACCACTGC
CCGGCCGGCA GCACGCCTGA TGTCAATCCG CACGCCACCT GCTTCACCCC GAAAACCGCC
AAGAATACCG ATGGTTTCGA TCCGGGCCAG TCGAAGAATG TACTGCTGAC GTATTCGTAC
ATCGCTACCG GCGATGACGG TGTTGCGATC AAGGCACATG CCAGTAGCAA GCGCAGCATC
GCATCGGAAA ACATGCTGTT CACCTACAAC CAGTTCTATT ACACACATGG TTTTTCATTG
GGCAGCGAAA CCGACTCGGG CATGCGCCAT ATCGCCGTGC GCGGGCTGAG CATCGATGGC
TTCAATAGCA ACGATGTACA CGACGACCCG TATTCTTCCA ACGGGCTGCG GATCAAATCC
GATGGCACGC GCGGCGGCCA GGTCTACGAC ATCAGTTTTG AAAACATCTG CATGCGCGGC
GTGGCAAGGC CGCTGGTGTT CGATGCGAAC TACGCCAATG CAGCAGTGCG CAGCAAACTG
CCGAGTTTCA GCGGCATCAC GCTGACCAAT GTGCACTCGC TGGGTTCCAA GGCATTCGGC
GGCGGCGAGC TGAGCTTCTA CGGCTACCGC GATGCGAAGA CCACCTTGCC GATCAGCATT
TCGCTGGACA ACGTGGTGCT GGAAGGTGGA AAGGTCTCGT TCGCAAAGCC GCATTTCGGC
GGGCCTGCGA GCAACCCGGG CACGACGCAT TTCACGTTTA AAGGCGGTCC AGTGAGCTTT
TTCGATCAGC TGACCGAATC AGCGTCCAAC GATGTGCAGC TGCAAGGGAA GCCTGGCCCT
GGCGTGCCGT TGCAATGCAA CGACGCCTTC ATCGCCTACC ACTCGGTGCT GCCGGATTCG
CCGATCTGA
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| Protein sequence | MKPPDQHSNT DAACVRVAGS SHHAHAGISL PLADLARLPH STGPTPMQSH RFVPTVTPLT
LALLGLATFH ASAARPHGQY VPDTAHSIST SWGVVQQPTL PTQVCATLKA ALMPVGGSLD
TLDQNPADSK RDTARLQAAI DHCPAGSAVH LVPGDAGESG LLTGPLTIKS GVTLWIDGGV
TLFGSRNPLD YDNGLGTCGT ATSDKTKSCK PLIHVADTAK SAIVGAGKID GRGGSTLTAG
PNAGTASWWD LAYLNVTKGL SQHVPRLLQI DDSTDFTLYD ITLENSANFH VTTDNVVGLT
AWGIKILAPS LVYSRPGYHC PAGSTPDVNP HATCFTPKTA KNTDGFDPGQ SKNVLLTYSY
IATGDDGVAI KAHASSKRSI ASENMLFTYN QFYYTHGFSL GSETDSGMRH IAVRGLSIDG
FNSNDVHDDP YSSNGLRIKS DGTRGGQVYD ISFENICMRG VARPLVFDAN YANAAVRSKL
PSFSGITLTN VHSLGSKAFG GGELSFYGYR DAKTTLPISI SLDNVVLEGG KVSFAKPHFG
GPASNPGTTH FTFKGGPVSF FDQLTESASN DVQLQGKPGP GVPLQCNDAF IAYHSVLPDS
PI
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