Gene PXO_00184 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00184 
SymbolexoD 
ID6305168 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand- 
Start bp1689403 
End bp1690020 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content63% 
IMG OID642638939 
ProductExoD protein 
Protein accessionYP_001912815 
Protein GI188575886 
COG category[R] General function prediction only 
COG ID[COG3932] Uncharacterized ABC-type transport system, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value0.358269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTTACC GCAACGAACG CATTCGCAGC TTGCTGGCGG CCTTCAGCGA GAGAGACCCG 
GACCAGGTGT TACGTGTCCG CCAGATCCTG GCCGATCTGC AACAAAGCGC CTTCGGCGTA 
TTTTTGTTTC TGGCGATCCT GCCCTCGTTC ATCCCGATTC CCGGCGTTGC CGGTGGCATC 
AGCGGACCAC TGACGATACT GATCGGGCTG CAGATGATGT GCTGCCTGCG CAAGCCGTGG 
GTAACGCGCT TCATCGGCGA GCGTGGGCCG CGCCGTCGCA CCAGCCAGCG TTTCGTCTCC 
ACATTCGGGC CGACAATGCA GCGCCTGGAT CGCCTGCTCA AACCGCGTCT GCACGGCATG 
CTGGACAGGA TGCCGGCGCA AGTATTCACC GGCCTGCTGC TGGTACTGAT CGGCAGTTTG 
CTGACGCTGC CGATCCCGTT CACCAACTAT CTTTTCGGAT TGATCCTGCT GCTATTTGCC 
CTGGCCCTGC TCGAGCGCGA TGGCGCGCTG ATGCTGGCGG GCTGGGCCGC CGCGCTGATC 
TCGGTGGCCG TCTTCGGCGT CACTTCCGAC CAGCTGGTAG ACCTGATTCG CGACTGGTGG 
CCGGACGCCT GGCGCTGA
 
Protein sequence
MRYRNERIRS LLAAFSERDP DQVLRVRQIL ADLQQSAFGV FLFLAILPSF IPIPGVAGGI 
SGPLTILIGL QMMCCLRKPW VTRFIGERGP RRRTSQRFVS TFGPTMQRLD RLLKPRLHGM 
LDRMPAQVFT GLLLVLIGSL LTLPIPFTNY LFGLILLLFA LALLERDGAL MLAGWAAALI 
SVAVFGVTSD QLVDLIRDWW PDAWR