Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PXO_00024 |
Symbol | |
ID | 6305326 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xanthomonas oryzae pv. oryzae PXO99A |
Kingdom | Bacteria |
Replicon accession | NC_010717 |
Strand | - |
Start bp | 1846073 |
End bp | 1846564 |
Gene Length | 492 bp |
Protein Length | 163 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642639096 |
Product | TonB-dependent receptor |
Protein accession | YP_001912969 |
Protein GI | 188576040 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
TIGRFAM ID | |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.0168751 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGACGGTCG CCGACCCCGA CAATGCGGGC TACTACATCC AGAGTGGCCA ACAACGCGCA CGCGGCCTGG AAATGGACAT GGTGTGGGAA CCCAGCCTGG CCTTCTCGTT ATTGGCCAAC TACGCCCATA CCGATACACG CGACGACGGC ACATCGCCTG GCGATCGGGT CGCACGGGGG CCCGACAACA GCGGCCGCAT CGCCGCACGC TACCGGATAC TCAGTGGTCC GGCCCAAGGG CTTGGCGTGG GCGCGGGCGT AACGGCAGTC AGTCCGCGGG AGCTCACGCT GCCCAATACC ATCGCCCTCC CCGGCTATGC CGTGTTCGAT GCGCAGGCGT CGTATGACGT CGGTCGGTTC ACCCTGGGGC TTTCGCTGGT CAACCTGACC GGGCGTAAGG CCTGGGACCC CTCTTCGTAC ATGGGTTACC CGGTCGTGGC GCCCAACCAG CCGCGCTCGA CCTATGTCAC CCTCAAAATG GACCTGAAAT GA
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Protein sequence | MTVADPDNAG YYIQSGQQRA RGLEMDMVWE PSLAFSLLAN YAHTDTRDDG TSPGDRVARG PDNSGRIAAR YRILSGPAQG LGVGAGVTAV SPRELTLPNT IALPGYAVFD AQASYDVGRF TLGLSLVNLT GRKAWDPSSY MGYPVVAPNQ PRSTYVTLKM DLK
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