Gene PXO_00024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPXO_00024 
Symbol 
ID6305326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameXanthomonas oryzae pv. oryzae PXO99A 
KingdomBacteria 
Replicon accessionNC_010717 
Strand
Start bp1846073 
End bp1846564 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content65% 
IMG OID642639096 
ProductTonB-dependent receptor 
Protein accessionYP_001912969 
Protein GI188576040 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1629] Outer membrane receptor proteins, mostly Fe transport 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.0168751 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGACGGTCG CCGACCCCGA CAATGCGGGC TACTACATCC AGAGTGGCCA ACAACGCGCA 
CGCGGCCTGG AAATGGACAT GGTGTGGGAA CCCAGCCTGG CCTTCTCGTT ATTGGCCAAC
TACGCCCATA CCGATACACG CGACGACGGC ACATCGCCTG GCGATCGGGT CGCACGGGGG
CCCGACAACA GCGGCCGCAT CGCCGCACGC TACCGGATAC TCAGTGGTCC GGCCCAAGGG
CTTGGCGTGG GCGCGGGCGT AACGGCAGTC AGTCCGCGGG AGCTCACGCT GCCCAATACC
ATCGCCCTCC CCGGCTATGC CGTGTTCGAT GCGCAGGCGT CGTATGACGT CGGTCGGTTC
ACCCTGGGGC TTTCGCTGGT CAACCTGACC GGGCGTAAGG CCTGGGACCC CTCTTCGTAC
ATGGGTTACC CGGTCGTGGC GCCCAACCAG CCGCGCTCGA CCTATGTCAC CCTCAAAATG
GACCTGAAAT GA
 
Protein sequence
MTVADPDNAG YYIQSGQQRA RGLEMDMVWE PSLAFSLLAN YAHTDTRDDG TSPGDRVARG 
PDNSGRIAAR YRILSGPAQG LGVGAGVTAV SPRELTLPNT IALPGYAVFD AQASYDVGRF
TLGLSLVNLT GRKAWDPSSY MGYPVVAPNQ PRSTYVTLKM DLK