| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5405 |
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| Symbol | |
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| ID | 1187092 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 6136852 |
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| End bp | 6137733 |
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| Gene Length | 882 bp |
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| Protein Length | 293 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637396722 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_795132 |
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| Protein GI | 28872513 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATCA AGCAACTTAA ATTTCTGATC GCCCTTGATG AAACAAGGCA TTTCGGTCAA
GCGGCTGCGC GCTGCAACAT CACTCAGCCG ACCTTGTCGA TGCGCCTGCG CAACCTGGAA
GAAGAGCTTG GCTTGCCGCT GGTCAATCGT GGCCAGCGTT TTGAAGGGTT TACCGCGCCG
GGCGAACGCG TACTGGCCTG GGCGCGTACG GTACTGGCAG CCTATGACGG TTTGCAGGCT
GAAGCCGCTG CCTGCCGTGG GCATCTGGTC GGTACGCTGC GTCTGGGCGT GGTGCCCATG
TCGAGCTTCG ATCCGTTGCC GTTGCTGCAT CGCCTGCATC AGTTGCACCC CAACCTGCGC
TTTGAGCTGT CGTCACTCAG TTCCGAGCAG GTTCTGGAGC AACTGGCGAG CAATCGCATC
GATCTGGGCG TCTCGTACCT GGAACGCCTG GACAGCGAGC GCTTTGACTC ATTGACCCTG
GACGAAACGC GCATGGGGCT GCTGTATGAC CGTCGGCACT TCACGTTTGG TGATACGCCG
TTGAGCTGGG CGGATCTGGT CGAATTGCCG CTGGGCACAC TGACCAGCGG CATGCATTTT
CGCCAATCGA TCGATCACAA CTTCCACAGT CGCGGCCTGC AACCCAATCC GCTGATCCAG
ACCGATGCCG TTCATCAGTT ACTGCAGGCT GTTCATGGCG GTTTTTGTTG CGCGATCATG
CCGCTGGACG GCGGCCTGGA AACGCTCACC GAACATTTGC ACCTGCACCC GATTGCCGAC
GCCTGCACGT TGGCCCGGCT GGGCTTGATC ATGCGCCGCA GTGCACCGCG TTCGGCACTG
GCTGAAGCCT GCTTTGCACT GGTGGCAGAG ATCCCGCGAT GA
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| Protein sequence | MDIKQLKFLI ALDETRHFGQ AAARCNITQP TLSMRLRNLE EELGLPLVNR GQRFEGFTAP
GERVLAWART VLAAYDGLQA EAAACRGHLV GTLRLGVVPM SSFDPLPLLH RLHQLHPNLR
FELSSLSSEQ VLEQLASNRI DLGVSYLERL DSERFDSLTL DETRMGLLYD RRHFTFGDTP
LSWADLVELP LGTLTSGMHF RQSIDHNFHS RGLQPNPLIQ TDAVHQLLQA VHGGFCCAIM
PLDGGLETLT EHLHLHPIAD ACTLARLGLI MRRSAPRSAL AEACFALVAE IPR
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