| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_5216 |
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| Symbol | |
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| ID | 1186901 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 5938115 |
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| End bp | 5938897 |
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| Gene Length | 783 bp |
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| Protein Length | 260 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637396535 |
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| Product | lipoprotein, NLPA family |
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| Protein accession | NP_794947 |
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| Protein GI | 28872328 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1464] ABC-type metal ion transport system, periplasmic component/surface antigen |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases
[TIGR00363] lipoprotein, YaeC family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAAAGA CGTTTTTGAT CACCGCTCTG GCGGCTGCGC TTTCGATTGG CCTGGCTCAC
GCAGGCGAAA AACTGGTCGT CGGCGCAACG CCCGTACCGC ACGCGGAAAT CCTTGAGCTG
ATCAAGCCGA CCCTGGCCAA AGAAGGCGTG GACCTGGAAA TCAAGGTCTT CACTGACTAC
GTACAGCCCA ACGTTCAACT GAACGAAAAG CGTCTGGACG CCAACTACTT CCAGACCAAG
CCTTACCTGG ACGGCTTCAA CAAAGGCAAG GGCGCCAATC TGGTGACCGG CGTTGGCGTA
CACGTCGAAC CGTTCGGTGG CTACTCCAAC AAGTACAAGA AACTGGCTGA CCTGCCTGAA
GGCGCAACCA TCGCCATCCC GAACGAAGGC AGCAACGCCG GTCGTGCCCT GCTCCTGTTG
CAGAAAGGTG GCCTGATCAC CCTGAAGGAC CCGACCAACG CCCTGGCCAC GCCTAAAGAC
ATCGCGACCA ACCCGAAAAA ACTCAAGTTC CGCGAACTGG AATCGGCTGT ATTGCCGCGC
GCCTTGAGCC AGGTTGACCT TGCCTTGATC AACACCAACT ACGCGCTGGA AGCCAAGCTC
AATCCGAAGA AGGATGCGCT GATCATTGAG GGCGCTGATT CGCCGTACGT GAACTTCCTC
GTCACCCGCG AAGATAACGC CCACACCGAC GCCATCGAAA AACTGTCGAA AGCGCTGACC
AGCCAGCAAG TCAAAGACTT CATCAACAAG AAGTACGACG GCGCGGTACT GCCTGCGTTC
TGA
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| Protein sequence | MKKTFLITAL AAALSIGLAH AGEKLVVGAT PVPHAEILEL IKPTLAKEGV DLEIKVFTDY
VQPNVQLNEK RLDANYFQTK PYLDGFNKGK GANLVTGVGV HVEPFGGYSN KYKKLADLPE
GATIAIPNEG SNAGRALLLL QKGGLITLKD PTNALATPKD IATNPKKLKF RELESAVLPR
ALSQVDLALI NTNYALEAKL NPKKDALIIE GADSPYVNFL VTREDNAHTD AIEKLSKALT
SQQVKDFINK KYDGAVLPAF
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