Gene PSPTO_5034 details

Gene Information

• Locus tag: PSPTO_5034
• Symbol: pilG
• ID: 1186719
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 5736250
• End bp: 5736660
• Gene Length: 411 bp
• Protein Length: 136 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 637396355
• Product: type IV pilus response regulator PilG
• Protein accession: NP_794767
• Protein GI: 28872148
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACAAC ACGCCTCTGC ATTGAAAGTC ATGGTCATCG ATGACTCGAA GACCATCCGC 
CGCACCGCCG AAACGCTGCT TAAAAACGCA GGTTGCGAAG TCATCACTGC GATAGACGGT 
TTTGACGCGC TGGCCAAGAT TGCCGATAAC CACCCACGAA TCATATTCGT CGATATCATG 
ATGCCGCGTC TGGACGGCTA CCAGACGTGC GCACTGATCA AGAACAACCG TGCATTTAAG 
TCCACGCCGG TCATTATGCT GTCCTCCAAG GACGGTCTGT TCGACAAGGC CAAGGGGCGA 
ATCGTCGGTT CCGATCAGTT TTTGACAAAG CCTTTCAGCA AGGAAGAACT GCTCAGCGCG 
ATCAAGGCTC ATGTGCCGGG CTTCGTTGCA GCAGAACAAC ACATATCGTG A 

 

Protein sequence

MEQHASALKV MVIDDSKTIR RTAETLLKNA GCEVITAIDG FDALAKIADN HPRIIFVDIM 
MPRLDGYQTC ALIKNNRAFK STPVIMLSSK DGLFDKAKGR IVGSDQFLTK PFSKEELLSA 
IKAHVPGFVA AEQHIS