Gene PSPTO_5015 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_5015 
Symbol 
ID1186700 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand+ 
Start bp5701382 
End bp5702053 
Gene Length672 bp 
Protein Length223 aa 
Translation table11 
GC content52% 
IMG OID637396336 
Productlyase, putative 
Protein accessionNP_794748 
Protein GI28872129 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCGATC TCGGATCGTA CCAACTCAGC ATTCCAGTGG GCTCACCCCC CAAGACCATT 
ACAACCGCTC AGCTTGTGAA AGGTTATGAC GGCAAATACT TCAAATCCAA ATCGGACTCC 
ATTGTGTTCT GGTCACCGGT AACCGGGACC AAGACCGAAA ACGCCAAGTA TTCACGCAGC 
GAGTTACGGG AAACATGGTC CGACGGCACG CTGCGTAACT GGGTGTACCC GGATGCGGAC 
AATTACCTGA ACGCCAAACT GGAAGTCGAT CAGGTACCTT CGTCGGGCAA GATCGTGATC 
GGCCAGATCC ACGCCTACGA AAGCACCGAA CCGCTTCTGA AAGTCGAGTA CCAGTACAAG 
GAAGACACCA AGACTGGCGA CATCGTTGCG AAAGTTCGCA ATCGTTATGA TGACGACGAC 
AGCAAGGTCT ATACGATAGT CGAAGGTGTG AAGCTGAATC AGACCTTCAA TTACGTCATT 
CACCTGAGCA AGGGCGGCAA ATTGACGGTC AGCATCAACG ACACCGACTG GAGCAAGAGC 
ATCAGCAAGA CCTGGCGCGA CAAGCCGCTG TACTTCAAGG CAGGTGTTTA TACCCAGGAC 
AATACCGGGT ACACCTCGGA GGGCGGCAAG GCCACGTTCT ATAACCTTGA TATCGATCAC 
AACAAAAGCT GA
 
Protein sequence
MIDLGSYQLS IPVGSPPKTI TTAQLVKGYD GKYFKSKSDS IVFWSPVTGT KTENAKYSRS 
ELRETWSDGT LRNWVYPDAD NYLNAKLEVD QVPSSGKIVI GQIHAYESTE PLLKVEYQYK 
EDTKTGDIVA KVRNRYDDDD SKVYTIVEGV KLNQTFNYVI HLSKGGKLTV SINDTDWSKS 
ISKTWRDKPL YFKAGVYTQD NTGYTSEGGK ATFYNLDIDH NKS