6 homologs were found in PanDaTox collection
for query gene PSPTO_4571 on replicon NC_004578
Organism: Pseudomonas syringae pv. tomato str. DC3000



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_004578  PSPTO_4571  binary cytotoxin component, putative  100 
 
 
399 aa  815    Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.206387  n/a   
 
 
-
 
NC_004578  PSPTO_5625  binary cytotoxin component, putative  26.49 
 
 
407 aa  162  1e-38  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_3989  hypothetical protein  26.47 
 
 
406 aa  154  2e-36  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.387633  normal  0.377982 
 
 
-
 
NC_007005  Psyr_4244  hypothetical protein  26.2 
 
 
414 aa  118  1.9999999999999998e-25  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.563528  normal 
 
 
-
 
NC_011729  PCC7424_3040  hypothetical protein  22.82 
 
 
420 aa  99.4  9e-20  Cyanothece sp. PCC 7424  Bacteria  n/a    normal  0.5278 
 
 
-
 
NC_010322  PputGB1_4365  hypothetical protein  21.66 
 
 
396 aa  95.5  2e-18  Pseudomonas putida GB-1  Bacteria  normal  0.146122  normal  0.0238355 
 
 
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