Gene Psyr_3989 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPsyr_3989 
Symbol 
ID3369525 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. syringae B728a 
KingdomBacteria 
Replicon accessionNC_007005 
Strand
Start bp4747685 
End bp4748905 
Gene Length1221 bp 
Protein Length406 aa 
Translation table11 
GC content51% 
IMG OID637654347 
Producthypothetical protein 
Protein accessionYP_237057 
Protein GI66047216 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.387633 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.377982 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTGAGTC AAGCAGCACT GATGGAAAAC GACACGCTCG CGCGGGTCAC CTTAAAACCC 
GTAGAGTATT TGAACCTTAT ACTTGATGAT GAAAAAAAGG GTGGCCGTGG CGCCGCGCTT
ATTTTGACCA AAGAAGACAT TCTTAGTCTG AAACGTTACG AACGACACGC CCTTAACATC
CCCACGTCAC TCGCTCGCGT CGAACAGCAA TTGGGTTTTA CAACCATTAG CATTCCCGGG
CTTGAGCCTA AAGACATGCT GGTGACTTAC AAGGCAATCC ACAACCACGG CAAAAGCTGG
CTGGGTATCG AGGACGCCAT CAAGCGCAGC GGTTTCACCA TTGACCTGTT TGCCGCACAC
TTCTCGGATC AGGGTCGGCA GATCATCAGT TACATTGAAA AAATGGACTT TGCCAGGCAG
CTGGGTCTGA CCGTTGTCGA TCTGACCCTT GAAGAGGTCC GCGATACATC GCCCACGCCA
CTGGGGCAAA CCGACCAGAA GGTCTGTATC ACGCTGGCCC AGTTCCTGAA AGAAACCGCG
TCACAAATAA AGAACCATCA GCACGCGGCC AGCACGTTGG CGCAACACAT CGATACCTTC
AGCACCGTCC TGAGCGTTCA ACTCATTCCC GGCATCAACG ATAAGGTAAA ACTGGCAAAG
CGCTCTGATC TCGACCAGCA GATCAGCGAA CTGGAAAAAG ACATCGAACA GCTGACCGTC
GATATAGAAC ACAAGAACAA AGAATATAAG ACAGCCATAA CCAATATTGC CTGGGGTGGT
TTCGGAGGGC CCATCGGGGT TGCTATCACG GGAGGCATTT TTGGCGCCCA GGCGGAAAAA
ATCCGGAAAG AAAAAAACCG GATGATCGCC TCCAAGAACC TCAAGGTTCA GACACTCAAG
GAAAAAGTTC CGTTGGCCGC CGCCGTACGC AGCCTGCAGA TACTCTTCGA GGATATGAAT
ATTCGCATGA TGGACGCTCA TCAGAGTGCG ACCAATCTGA AAGACCTATG GACCCTGCTG
GCGGCATACA TTGACAGCTC TGCAGATGAA CTGGCAGCGA TCAGCGACGA TCAGGCACTG
ATGATTTTCG CTATACGGTT TCAGGCCGTA GTCACGCCGT GGCTGGAAAT AAAAAGCATG
ACCGCCCAGT TACTGAAGCT GTTTGAAAGT GCGCTGGACC AGTTTCAACA CGAACAGCAA
TCCAGCCTGA AAGGACAATG A
 
Protein sequence
MLSQAALMEN DTLARVTLKP VEYLNLILDD EKKGGRGAAL ILTKEDILSL KRYERHALNI 
PTSLARVEQQ LGFTTISIPG LEPKDMLVTY KAIHNHGKSW LGIEDAIKRS GFTIDLFAAH
FSDQGRQIIS YIEKMDFARQ LGLTVVDLTL EEVRDTSPTP LGQTDQKVCI TLAQFLKETA
SQIKNHQHAA STLAQHIDTF STVLSVQLIP GINDKVKLAK RSDLDQQISE LEKDIEQLTV
DIEHKNKEYK TAITNIAWGG FGGPIGVAIT GGIFGAQAEK IRKEKNRMIA SKNLKVQTLK
EKVPLAAAVR SLQILFEDMN IRMMDAHQSA TNLKDLWTLL AAYIDSSADE LAAISDDQAL
MIFAIRFQAV VTPWLEIKSM TAQLLKLFES ALDQFQHEQQ SSLKGQ