Gene PSPTO_4372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4372 
Symbol 
ID1186053 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4934495 
End bp4935175 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content54% 
IMG OID637395713 
Producthypothetical protein 
Protein accessionNP_794127 
Protein GI28871508 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGATC GCATCGAACT CGAATTTTCC CGCAAGTACG ACAAGTCACA TGCCCGTCAG 
TACCTTGAAA AACACCAGGA CGGCATTTGG CGCAAGTTGT CGCATCATCG CGATGAGCAA 
CTGGCGAGAA AAGCTCTGCA CATGGCGGGT GATCCCGGGC TGGTGCTGGA CCTGCCTTGC 
GGTGCTGGCC GCTTCTGGCC GCTGCTGGCC GAGAAACCCA ACCGCTCGAT CATCGGCGCG 
GACAACTCCG CCGACATGCT CAGCACCGCC TGTGCATCTC AACCGGCAGA AGTTGTGAAA 
AGGGTACAAC CCTTGCAGAC ATCTGCGTTT GATATCGATT TGCCGGACAA CGCAGTAGAC 
AGCATCTTTT GCATGCGCCT GCTGCACCAT GTTGGGCAGT CGAGCGACCG AATGGCTCTA 
TTGCGTGAGT TCCAGCGCGT CACGCGCGAC AGTGTGATTG TTTCGCTGTG GGTTGATGGC 
AACTTCAAGG CATGGCGGCG CGAGCGTCTG GAGAAAAAAC GTCAGCAGAA AAATGGGCAG 
GAAAGTTACC AGAATCGGTT TGTGTTACCG GTTGCTACCG CAGAAACAGA ATTTGAGCAG 
GCGGGATTTC GCATTCAGAA TCGAATGGAC TTCTTGCCGA TGTACGCCAT GTGGCGAGTT 
TATGTCTTAC GTAAAAGGTA A
 
Protein sequence
MSDRIELEFS RKYDKSHARQ YLEKHQDGIW RKLSHHRDEQ LARKALHMAG DPGLVLDLPC 
GAGRFWPLLA EKPNRSIIGA DNSADMLSTA CASQPAEVVK RVQPLQTSAF DIDLPDNAVD 
SIFCMRLLHH VGQSSDRMAL LREFQRVTRD SVIVSLWVDG NFKAWRRERL EKKRQQKNGQ 
ESYQNRFVLP VATAETEFEQ AGFRIQNRMD FLPMYAMWRV YVLRKR