Gene PSPTO_4071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_4071 
Symbol 
ID1185751 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand- 
Start bp4576746 
End bp4577321 
Gene Length576 bp 
Protein Length191 aa 
Translation table11 
GC content57% 
IMG OID637395418 
Producthypothetical protein 
Protein accessionNP_793833 
Protein GI28871214 
COG category[S] Function unknown 
COG ID[COG3506] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.0615371 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTCGAAA AAGGTATCTG GTTGAACGAA CCCAGGCAGT GGAGCGTGAC GGATCAGCGC 
CTGACTGTCA TCACAGACCC CGAAACTGAC TTCTGGCAGC AGACGCATTA TGGCTTCTGT 
CGAGACACCG GCCATTTTCT AGGTGTTTCA GTGAAGGGTG AATTCACCGC GCAAGTGCAT 
GTGCAGGGCG ATTTCAAGAC CCTGTATGAC CAGGCGGGCC TGATGGTGCG AGTCGATGAG 
CGCAACTGGG TAAAAACGGG TGTCGAGGTC AGCGATGGCG CCCTGATGCT GGGCAGTGTT 
TTGACCTGGG GGCAGTCGGA TTGGGCCACG GGCGTGTTTG ATGACTCCTC ATCAGGGCTC 
TGGCTGCGAG TCACTGTCGC CAAGGGCGTA ATGCGCATTC AGCATTCCAG CGACGGGCTG 
CGCTGGCCAT TGTTGCGTCT GGCAGCATTC CCGCTGAGCG AGCGTTATGC CGTAGGGGCC 
ATGTGCTGCA GCCCGGAGCG GGGAGGGCTT AAAGTGGTGT TTTCTCATTT CGAAGTCATG 
CCTGCGCTGG GCAAGGATTT GCATGATCTG ACATGA
 
Protein sequence
MFEKGIWLNE PRQWSVTDQR LTVITDPETD FWQQTHYGFC RDTGHFLGVS VKGEFTAQVH 
VQGDFKTLYD QAGLMVRVDE RNWVKTGVEV SDGALMLGSV LTWGQSDWAT GVFDDSSSGL 
WLRVTVAKGV MRIQHSSDGL RWPLLRLAAF PLSERYAVGA MCCSPERGGL KVVFSHFEVM 
PALGKDLHDL T