Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3892 |
Symbol | |
ID | 1185563 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 4404888 |
End bp | 4405505 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637395242 |
Product | hypothetical protein |
Protein accession | NP_793663 |
Protein GI | 28871044 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0392964 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGTTCGAT TCGCTGCGTG GGCGAATCTG CCCAAACCCT GCGCCAGCTA TCGCGACTGG CAATCAGGGC TCATGCAGTT TGTCGCGTTC AGGAACATGT TTATGCCATC GACCGATCGA TTTAGTCTGA AGATCCCTAA CGCGCGCCAG CTGGCCGGCT GTGCCGCACT CGCTGCCGCA GTGATGCTGC CGGTCAGCGC GGCCCACGCC GCAAAACCAC CCATCGTTGT GACCGAGGGA ATCAAGGCTT TCAGGCTGTG CACAGGGCCC GACAACCTGT CTCACGTCAT CGAAGGATCG ATTGACCAGA AGGTCATGAC CGATGTCAGC GCCTTGCACT TCAAGGAAAC CCCGGCGCAC TCGCAATACG ACTGGCACGC CGCGCCAGAA GAGCAATACG TGATCACCCT TTCCGGTACC CTCGAATTTT CCACCACCGG TGGAGAAAAT TTTGTGCTGC ACCCCGGGGA AGTACTGCTG GCACAGGACA CTACAGGCCC AGGCCGTCGC TGGAAGCTGC TTGATGACCA GCCTTGGCGA CGCGCCTACA TCATCACCAA ACCGGGCGAA AAAGCTGCCT TCGTGCCCAA GGCGGGGGCG GCCGACAAAG GGTGCTGA
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Protein sequence | MVRFAAWANL PKPCASYRDW QSGLMQFVAF RNMFMPSTDR FSLKIPNARQ LAGCAALAAA VMLPVSAAHA AKPPIVVTEG IKAFRLCTGP DNLSHVIEGS IDQKVMTDVS ALHFKETPAH SQYDWHAAPE EQYVITLSGT LEFSTTGGEN FVLHPGEVLL AQDTTGPGRR WKLLDDQPWR RAYIITKPGE KAAFVPKAGA ADKGC
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