Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3690 |
Symbol | |
ID | 1185355 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 4157261 |
End bp | 4158121 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637395037 |
Product | hypothetical protein |
Protein accession | NP_793464 |
Protein GI | 28870845 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.271759 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAAAGC TCACAGTCCC CGCTTTTGAC GCAACCGACG TGTTCGATAC GTGTGTCAGC GGTCTTGATA ACCCTGATTT AGCAGAAAGG TTTAAAGCTG CGCGTGATTC GATTATCGAG CTTTTTCTCG GTTATACGGA AAAAGCCAGC ACGAGCGAGT TGTACTGTCT GCCGTTGAGT GCGCATGCCA AGCCGGACCA AGAGGTGGTG GCGACACTGA CCAAAAAAGA GTTTATGTCG CTGTACTCGA ATCAACTGTT GAATAAAGGG AAGGCGGCGC GCACGTATTA CGATAAGTTA ATCATCTCTG CGCCCCTTGC AAAATGCCCA CTCTGTGGAT TTGGTCAGGC CACGACGCTT GATCATTTTT TATCCAAAGC CAGGTACCCG GCTTACTCTA TATTGCCCAT TAATCTGGTG CCGGCATGCA CTGATTGTAA TAAGGTCAAG GGCGCCTGCG CGGTGACTGA AGCCAATCAG CAGTCTCATC TTTATTTTGA ATGTGTGAGG TTCGAAAAGG AGCCTTGGGT TTTTGCAGAG CTGGTCGAGA CGACGCCTCC CACTATTCGA TATTTTGCAG ACCCCCCTGG AGAATGGCCT GACCCGCTGA AGTTACGCGC GAAAAATCAC TTCAAGAATT TGGACCTCGC GCGCCGCTTT GGTATAGAGG CCGCTGCAGA ACTTTCAGGA ATGATTGAAG TGCTTGACGA CCTGGAGACG TGTAAGGATA GAAAGGATCA CCTTAAAAGA TTTGCTTCTT CCGAAAGGAA GAATAGAGCC AACCATTGGA AGGCCCCGAT GTATGAGGCC CTTTCAGAAA GTCAATGGTT TCAATCAGGC GGTTACAAAA GCTATATCTG A
|
Protein sequence | MKKLTVPAFD ATDVFDTCVS GLDNPDLAER FKAARDSIIE LFLGYTEKAS TSELYCLPLS AHAKPDQEVV ATLTKKEFMS LYSNQLLNKG KAARTYYDKL IISAPLAKCP LCGFGQATTL DHFLSKARYP AYSILPINLV PACTDCNKVK GACAVTEANQ QSHLYFECVR FEKEPWVFAE LVETTPPTIR YFADPPGEWP DPLKLRAKNH FKNLDLARRF GIEAAAELSG MIEVLDDLET CKDRKDHLKR FASSERKNRA NHWKAPMYEA LSESQWFQSG GYKSYI
|
| |