| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3648 |
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| Symbol | plcA1 |
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| ID | 1185313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 4108208 |
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| End bp | 4109890 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637394996 |
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| Product | acid phosphatase |
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| Protein accession | NP_793423 |
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| Protein GI | 28870804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3511] Phospholipase C |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR03397] acid phosphatase, Burkholderia-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.989112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGACA AACCAGAAGA CGAAAACACC AACGAGAACC CCGGCCGCCG TCGTTTTCTC
GGTGGTATGG CAGCCTTGGG CGCAGGTGTG ACGCTCAGTG GTTACGTCTC GGCTCATGAA
AGACCGCCCG CAGAGGCTGA AAAACATCAT CTGGTCGGAC CGGCGCTGGA CCGCGCACTG
CGTGAAAACG TCAAGACCGT GGTGGTCATC TACGCCGAAA ACCGCAGCTT CAATAACCTG
TTCGGGAATT TCCCGGGCGT GCAGAAACCC CTGTCTTCCG TCAGGCCTGC CGATTATGTG
CAGCGCGACC GCAATGGCAC CCTGCTGGAC AAACTGCCGC CGGCCTGGGG CGGTGTCCTG
CAAGTCGGGC CGCAGACCGT CGACGGCGTG ACCTACCCGG TGGGCGTGCA GTTTCAGGAA
AACCTGCCTA ACGCGCCCTT CCCGCTCAAG GGACCCAACG CCGAGGACCT GCCGCTGAGC
CTGGTCACCC GCGACCTGTG GCACGTTTTC TATCAGAACC AGATGCAGAT CAACGACGGC
AAGAACGACC GGTTCGTCGC CTGGGCCGAT GCCGGCGGGC TGACCATGGG CAACTACGCG
CAGACGCAGT ACTCGTTGCG TCTGTGGGAC GTCGCCAAGG AATTCGTGCT GTGCGATAAC
TTCTTTCAGG GCGCATTCGG CGGTTCGTTC CTCAACCATC AATACCTGAT CTCGGCCACT
GCGCCGATCT ACCCGAACGC CGCCGACTCG CCTGCAAAGT CGCAGATCGC CTCGTTGCAG
AGCATGAATC CGCTGGACTC GCGCCTCAAA CCACTGGACA AGTCACCCGC CAGCGCCATG
GAAGGGCCTC CACAGTTCGG CCCCAGCGCC ATCACCCCGG ACAACTACGC CGTCAACACC
CTGGCCCCGC CGTACTGGCC AACCTGGCTG CGCGACCCGC AGAACCCGGA TTACTCCAAA
CCGGACCTGG CCAACGTGCT GGTGCCGCAA AGCCACGAGC ACATCGGTGA CAAGCTGTCG
AAAAGGAATG TCGACTGGGC CTGGTACGCC GGGGCCTGGC AAGTGACGCT GGATGAATTC
AAGGACTCCA CCGGCATCCC GAAAATCCCC AATTTTCAAT ACCATCACCA GCCGTTCAAC
TACTTCAAAC AGCAAGGCCC GCAGAACCCT GAAGAACGCA AAAAGCGCCT GCGCGATGGC
GGCCTGGGCG ACGAATCGAG CACCAATCGC TTCCTCGCGG ACGCAGAAGC GGGCAAGTTG
CCTGCCGTGG CCTTCTACAA ACCTCAGGGC AACCTGAACA TGCACGCCGG TTATGCCGAC
GTGGCGTCGG GTGACCGGCA CATCGACCGG GTGATCAAGG TGCTGCGCAA CAGCCCGCAG
TGGGACAACA TGGTCATCGT CGTCACGGTC GACGAGAACG GCGGCTGGTG GGACCACGTC
GCACCGCCCA AAGGCGACCG CTTCGGCCCC GGCACGCGTA TTCCGGCACT GGTGATTTCA
CCGTTCGCGC GCAAAGGCAA AGTGGACCAC ACGGTTTACG ACACGGCCTC GATCCTGCGC
CTGATCACCC GCGTTCACGG TCTGGAAAAA CTCGACGGCC TGAAACGCCG CGACGAAGCG
ATGATCGCGC GCGGCCAGGC GCCCATGGGC GACCTGACCA ACGCCTTGCA CTTTCCCGCC
TGA
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| Protein sequence | MSDKPEDENT NENPGRRRFL GGMAALGAGV TLSGYVSAHE RPPAEAEKHH LVGPALDRAL
RENVKTVVVI YAENRSFNNL FGNFPGVQKP LSSVRPADYV QRDRNGTLLD KLPPAWGGVL
QVGPQTVDGV TYPVGVQFQE NLPNAPFPLK GPNAEDLPLS LVTRDLWHVF YQNQMQINDG
KNDRFVAWAD AGGLTMGNYA QTQYSLRLWD VAKEFVLCDN FFQGAFGGSF LNHQYLISAT
APIYPNAADS PAKSQIASLQ SMNPLDSRLK PLDKSPASAM EGPPQFGPSA ITPDNYAVNT
LAPPYWPTWL RDPQNPDYSK PDLANVLVPQ SHEHIGDKLS KRNVDWAWYA GAWQVTLDEF
KDSTGIPKIP NFQYHHQPFN YFKQQGPQNP EERKKRLRDG GLGDESSTNR FLADAEAGKL
PAVAFYKPQG NLNMHAGYAD VASGDRHIDR VIKVLRNSPQ WDNMVIVVTV DENGGWWDHV
APPKGDRFGP GTRIPALVIS PFARKGKVDH TVYDTASILR LITRVHGLEK LDGLKRRDEA
MIARGQAPMG DLTNALHFPA
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