| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3616 |
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| Symbol | |
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| ID | 1185281 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 4077186 |
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| End bp | 4078172 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637394966 |
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| Product | hypothetical protein |
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| Protein accession | NP_793393 |
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| Protein GI | 28870774 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.666747 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAGG CTTTGGTAAT TGGCATAGAT AATTATCCTA CTGCCCCGCT GATGGGTTGT
GTCAATGACG CAGTTGCTAT TGCTGAACTT CTGGAGAATG ATGGAAATGG CGATCCTAAC
TTTTCTGTTA TTAAATTGGT TAGCAATGAG CAGGATGTAA CGAGTGAATC GCTGATTAAC
GCGATCTCTG AGCTATTCAG CGGAGAAGCT GATACAGCGC TTCTATATTT CGCTGGGCAT
GGAATCATCG TTCCTGAGAC AAATGCGGGA TATATTGTAA GTTGTGATGG GCGTCGAGGC
GCCTGGGGTA CTTCACTTTC TGAAATTCTT GGACTGGCAA ATAAAGCTCA TCCGAAGATA
AAGTCTTGCG TGATCATCCT TGATTGTTGC CATTCGGGTT ACGCTGGAGA AGTGGCAGGA
GTTGATGGTA ATGCCTCAGC TATCGGTACT GGGGTCACTA TATTGACTGC GAGCCATCGC
GAAGGTGGCG CAATGGAGGA AGATGGTCGG GGGATTTTCA CGGATATTTT GCTTGATGGT
CTTAGGGGCG GCTGTTCGGA TATTCTAGGC AACATCACGC CAGCCGCAAT TTATTCCCAT
GTGGATCAAA CCCTTGGGCC ATGGGAGCAG CGGCCAATGT ATAAAGCAAA TGTTCAACAC
TTTGTAACAT TGCGAAAAGT TGAGCCGAAA GTCCCAAAAG ATGTTTTGCG AAGGCTGGTT
ACATACTTTC CAAACAAGAC TGATATATTT GCGCTTGATC CGTCTTTTGA GCCCGACAGA
ATAAACGTGC CAGAGGAGTT TAGGCATTTA CCGGTTAATG ATGAACATGT AAATATCTTT
AAAGAGCTCC AAAAATGTAA TCGTTACGGA CTAGTAGTGC CTGTAGATGC TGACCATATG
TTTTACGCTG CCATCAACTC GACGGGATGC AAGTTGACAG GCCTTGGGGC GCATTATAGA
AAACTAGCAG AGATGAAAAG AATATAA
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| Protein sequence | MKKALVIGID NYPTAPLMGC VNDAVAIAEL LENDGNGDPN FSVIKLVSNE QDVTSESLIN
AISELFSGEA DTALLYFAGH GIIVPETNAG YIVSCDGRRG AWGTSLSEIL GLANKAHPKI
KSCVIILDCC HSGYAGEVAG VDGNASAIGT GVTILTASHR EGGAMEEDGR GIFTDILLDG
LRGGCSDILG NITPAAIYSH VDQTLGPWEQ RPMYKANVQH FVTLRKVEPK VPKDVLRRLV
TYFPNKTDIF ALDPSFEPDR INVPEEFRHL PVNDEHVNIF KELQKCNRYG LVVPVDADHM
FYAAINSTGC KLTGLGAHYR KLAEMKRI
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