| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3501 |
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| Symbol | |
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| ID | 1185166 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3953783 |
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| End bp | 3954691 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637394854 |
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| Product | transcriptional regulator, RpiR family |
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| Protein accession | NP_793281 |
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| Protein GI | 28870662 |
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| COG category | [K] Transcription |
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| COG ID | [COG1737] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.671277 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACCAGCG CCGACCCGCC TACTCTGCCC GAGACCAGCG TCGACGTGCC GCCGACCAGC
GCCGAAGGGC TGCTGAAGCT GATCACCAAC GAGTACGACG GCCTGCCTCG CCAGCTCAAG
CGTATTGCCA GTTACATGAG CCAGCAGAGC GACCGCATCA TGGTCGACCG GATCAGTGAT
ATCGCACGCG AGTGCGAGGT TCATCCGTCT GCCATCGTGC GCTTTTCCCA GCGGTTCGGG
TTCAGCGGTT TCAGCGAGAT GCAGACCCTG TTTCGCGAGG CTTACACGCA CAAGACCACG
CCGGTGCAGA ATTACCAGCA GCGCATCCGC AGCATGATCG TCAACAAGTC GCAGAAAGCC
AGCGCCGGCG ATCTGGCACG CGAGTGCGTG AACGCCACCC TGTCCGGGCT GGAACGCCTG
AGTGCCGATC TGGACGATGA GGAATTCGAG AAGGCTGTGG ATCTGGTGGT CAATGCCGAC
AACATCTACG TGGTGGGCGT ACGACGCTCA TTCGCTGTGG CGGATTACCT GGTGTACAAC
CTGCAACACA CCAACAAGCG CATCCACCTG ATTTCAGGTT TGGGCGGCAG TTACCGCGAA
CAGATGCGCA GCGTACGCGC CAACGATCTG GTGATTGCCA TCAGCTTCAC GCCCTACGGC
AAGGAAACCC AGCACTGTCT GCGCATTGCC CAGCATCATC AGGCCAAAAC CCTGATCATC
ACCGACAGCA ACCTGTCGCC ACTGGCCAAA CGCGCCAACT CGGTGTTGCT GGTCAACGAA
GGCAGCTCGT TCGCCTTCCG CTCGCTGAGC GCGACACTGT GCCTGTGTCA GGCGCTGTTC
ATCGCAGTGG CGTATCGCCT GGAACTGAAG GTTGACGAGA TACATGAGCA GGTCGGGTTT
GATGATTGA
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| Protein sequence | MTSADPPTLP ETSVDVPPTS AEGLLKLITN EYDGLPRQLK RIASYMSQQS DRIMVDRISD
IARECEVHPS AIVRFSQRFG FSGFSEMQTL FREAYTHKTT PVQNYQQRIR SMIVNKSQKA
SAGDLARECV NATLSGLERL SADLDDEEFE KAVDLVVNAD NIYVVGVRRS FAVADYLVYN
LQHTNKRIHL ISGLGGSYRE QMRSVRANDL VIAISFTPYG KETQHCLRIA QHHQAKTLII
TDSNLSPLAK RANSVLLVNE GSSFAFRSLS ATLCLCQALF IAVAYRLELK VDEIHEQVGF
DD
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