| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_3293 |
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| Symbol | hopAH2-2 |
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| ID | 1184951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 3722818 |
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| End bp | 3724068 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637394643 |
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| Product | type III effector HopAH2-2 |
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| Protein accession | NP_793076 |
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| Protein GI | 28870457 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.819559 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACATCC ACACCGCCAG GTCCTATGAC CCCCTCATGG CCACCAGTGA AAAGCCTGCA
ACGGCAGACA GAACCACGCG GGCCGTGGAC GCTGGCGCTA CTGAGCCGAC CCCTGAAAAG
CAGGCGAAAC TCGACACCTA TACGGCCTCC GACAGCCGCT CCGCCGAGAC AGCGGAAGGG
TCCCCTGTTT ACACAAGGAT GATGCTCAGC CGAAATACCC GGTCACTGGA GAGCGAAGAT
TCCTCGTCAG ACACGGCTTT GCTTGCCAGT CAAAAAGCGC TTGTCAGCCA GAACGATACA
AAGGCTGTTG GCAGCGAAGT GGCCGCGGTG AAGGACAGCA CGGCCCTTTC GGACGCAGAA
AAAAAAGCCA AGGAAGCAGA AAAGGCCGCC TCTACAGAGG CAGCAAAAAC TGCCCAGACC
GTCGCGCGCG GGGGCGCCAA CGTCAATCCT GATGACATCG CCACACCGGC TGCGGCCACC
AAGATGATTC AGGACCTGAA AGCGATTGGA GGCGGAACCT TACGCATCCA GATGACGCAT
GATCAGATCC GGGACGTCAA GCAGATGGAC AAGCTACGGG CACTGCTCAA TGAAGGTGGC
AAACAGGATG TAAAGGTTCA GTTCACGTTT CGTGACAATG CGAACCAGGG CAGCGGCAAC
GTGCTGACGG GAGACAAGTT GAAGCAGGCT GCGGCCGACA TCAGCAGTGT GGTCAAAAAG
TTCGGCAGTC GTCCAGGCTT CGTGCTCGAC ACTTTCCATC AGGGCGGTAA CAGCGCCAGT
CAGGAGTGGT CCGACATGCA GACCACCTTG ATCAAGTCCG CGCGCAATGC CGGCTTTAAA
GGAAGCATTG TTGTCGAGGA CAGTAACTGG GGGGGTGGCC TGACCGCTGG CCCGCAGAGC
GGCCTGGTCA AGTTTGCCGA TCAATTGAAG GCCGCCAATG GCGAAGGCAA CCCTGCCCTG
ATTGGCGGTT TTCATGTGTA TGCCAGAGAA AGCGAAGCGT CTTCCCGGCT CGGAAAACAG
ATCAAGGCGC TTCAAGAGGC TGGCTATAAA TTGCAGATTG GCGAAGTGGG CAATGCCAGC
TTGCTGATAG GGAGCACCTT CCGGCAAAAG GACGATGCCA CCAAAGCCAT GACGGATAAC
ATGGCCGCTC TTAAAGCAGC GGGAGCGGAT ATTTTGCCCG GCAAGGACCA GTTCCAGGAC
GGCAAACTTC GCCGCCGTGT CGGATTTTCA AAGTCAGATC AGTACTCATG A
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| Protein sequence | MNIHTARSYD PLMATSEKPA TADRTTRAVD AGATEPTPEK QAKLDTYTAS DSRSAETAEG
SPVYTRMMLS RNTRSLESED SSSDTALLAS QKALVSQNDT KAVGSEVAAV KDSTALSDAE
KKAKEAEKAA STEAAKTAQT VARGGANVNP DDIATPAAAT KMIQDLKAIG GGTLRIQMTH
DQIRDVKQMD KLRALLNEGG KQDVKVQFTF RDNANQGSGN VLTGDKLKQA AADISSVVKK
FGSRPGFVLD TFHQGGNSAS QEWSDMQTTL IKSARNAGFK GSIVVEDSNW GGGLTAGPQS
GLVKFADQLK AANGEGNPAL IGGFHVYARE SEASSRLGKQ IKALQEAGYK LQIGEVGNAS
LLIGSTFRQK DDATKAMTDN MAALKAAGAD ILPGKDQFQD GKLRRRVGFS KSDQYS
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