Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3260 |
Symbol | |
ID | 1184918 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3685233 |
End bp | 3685862 |
Gene Length | 630 bp |
Protein Length | 209 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637394610 |
Product | acetyltransferase, GNAT family |
Protein accession | NP_793043 |
Protein GI | 28870424 |
COG category | [R] General function prediction only |
COG ID | [COG0456] Acetyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0366383 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGACGCG GAGCGTCGCA CGATAGTCGA GATTATTGTT CCTCACGCTC CAGCACCGGC ACGCGAATCG GCCGGCCCAC TCATGCCTGG CGCAACATTT GTATTACTCT GCGCCCCCCA GCCAAGTCAG TTGCCATGAA CATCACCATC ACCGAAGTGC ACCCCGCCGA TATCCCGCAA ACCGTCGACT TCGTCATGCG TGCCCGTGCC GAGATATTTC CGTTGCTCGA CGCCATCACC GTACCCCCTG ATCTGGCCGG TTTCGAACAG GTTTACCTGA GTGGCAAGGA CGGAAAATTT CTGATTGCCC GCTGTGACGA GCGGATCATC GCAGCAGTCG GCTACCTGCC TTACGACCAC CGCTTTGCGC AACTCGACTA CACAGGGCGC CGGACCGTCG AGATCGTGCG CCTTTATGTC ACGCCAGAGT TTCGCGGCGA CGGCCTGGCC AGTCAGCTAT GTCAGGCGCT TTGGGCGCAT GCCGCTGCGG GCGCAATAGA AGTGCTGTAC CTGCACACCC ACCCGTTTCT ACCCGGTGCT ATTCGCTTCT GGGAAAAACA GGGCTTTGCC GTCACCGATG TGGAAAGCGA TCCGCTGTGG AACACGACGC ATATGGAACG CGTGCTGTAG
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Protein sequence | MRRGASHDSR DYCSSRSSTG TRIGRPTHAW RNICITLRPP AKSVAMNITI TEVHPADIPQ TVDFVMRARA EIFPLLDAIT VPPDLAGFEQ VYLSGKDGKF LIARCDERII AAVGYLPYDH RFAQLDYTGR RTVEIVRLYV TPEFRGDGLA SQLCQALWAH AAAGAIEVLY LHTHPFLPGA IRFWEKQGFA VTDVESDPLW NTTHMERVL
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