Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3232 |
Symbol | |
ID | 1184889 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 3651385 |
End bp | 3651810 |
Gene Length | 426 bp |
Protein Length | 141 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 637394583 |
Product | hypothetical protein |
Protein accession | NP_793017 |
Protein GI | 28870398 |
COG category | [R] General function prediction only |
COG ID | [COG3565] Predicted dioxygenase of extradiol dioxygenase family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.405864 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTTT CTCCTTTTCA CCTCGCAATC CCTGTATATG ACCTGGCCGC CACCCGGACT TTCTACGGTG AAGTCTTCGG GCTTGCCGAG GGGCGTTCCA GTGCGCAATG GGTGGACTTC GATTTTTATG GCCATCAACT GGTCATTCAT GAACACCCGA AAACAGCGTC ACAGGAAAGC GTGCACAGCA ACCCTGTGGA TGGTCATGAC GTGCCGGTTC CGCATTTCGG CATCATTCTG CAATGGGCGC AGTGGGAAGC ACTGGCCGAG CGGTTGAGGT CATTCGACAC CAAATTTGTG ATCGAACCCT ACATCCGCTT CAAAGGGCAG GTCGGCGAGC AGGCCACCAT GTTCCTGTTT GATCCGTGCG GTAATGCGCT GGAATTCAAG GCGTTCAAAG ACATGAGCCA GTTGTTCGCC AAGTAA
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Protein sequence | MSLSPFHLAI PVYDLAATRT FYGEVFGLAE GRSSAQWVDF DFYGHQLVIH EHPKTASQES VHSNPVDGHD VPVPHFGIIL QWAQWEALAE RLRSFDTKFV IEPYIRFKGQ VGEQATMFLF DPCGNALEFK AFKDMSQLFA K
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