Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_3198 |
Symbol | |
ID | 1184855 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 3591973 |
End bp | 3592959 |
Gene Length | 987 bp |
Protein Length | 328 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637394552 |
Product | bacterial luciferase family protein |
Protein accession | NP_792986 |
Protein GI | 28870367 |
COG category | [C] Energy production and conversion |
COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
TIGRFAM ID | [TIGR03571] luciferase-type oxidoreductase, BA3436 family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.339171 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCCAGG ACAAGCCACT CAACCTGCAC AAATCGGGGG CGCACTCGGC GTTTTCGAAG GTTTTCGCAC CCGGCCATCT TACCTTTGGA CTGATTGCGC CGCTGGAGGG TTATCCGAAC TCGGCAGTGC CGACCATGGA CGACCATATC GCACTTGCGG TACAGGCAGA CAAGGCGGGT TTTGCCGCCC TGTGGCTACG CGATGTGCCC ATGCTCGATC CGGCGTTCGG CGACGCCGGG CAGATCTTTG ACCCGTTCGT GTACGCCGGG CTGCTGGCGG GTGTCACCCA ACGAATATGT ATCGGAACCG CGGGCATCGT CATGACACTG CGTCACCCGC TGACCGTGGC CAAACAGGCC TGCAGTCTGG ACGTGCTGCT CAAGGGGCGC TTTTTGCTGG GGCTGTCTAC CGGTGACAGA CCCAGTGAGT ATCCGGCGTT CGGGCAGGAT TTCGATACAC GAGCCGCACG TTTCAGAGAA TGCGTCGAGA TTCTACGCGC AGTGACAGAA CACTCTTTTC CCCTGTTGAC CACGCAGCAC TACGGGCAAT TGAACGGTGA GCTGGATCTT CTGCCCAAAC CCTGGAGCGG ACGACTGCCG ATGCTGGCAG TCGGTCGCTG TGGCCAGGAT ATAAAGTGGC TGGCAAACCA CATGGACGGC TGGATATGGC ACCAGAGCGG CTTCAATACA TTGCCTGAGG TCATCGACCA CTGGCGTGAA TCCAACGTGC AGAAACGCTT CAAACCCTAC GGTTATGCGA CATTTTTTGA TCTAGACGAC AACAAGGATG CCCCCATGAC CGTTGGGCGC GGCATCAGTA CAGGGCGAAA CGCGCTCATC AGGTTGTGGG AGCGCCAACG AGAAGAAGGC GTCTCGCATG TGGCGTTGAA CCTGAAACCT CTGAAGCGCC CCGCCAAGGA GGTGTTACAG GAGCTGGAAG AGTACGTATT GCCGTATTTT CCTACACGCC GGGGTAATCC GGTCTGA
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Protein sequence | MIQDKPLNLH KSGAHSAFSK VFAPGHLTFG LIAPLEGYPN SAVPTMDDHI ALAVQADKAG FAALWLRDVP MLDPAFGDAG QIFDPFVYAG LLAGVTQRIC IGTAGIVMTL RHPLTVAKQA CSLDVLLKGR FLLGLSTGDR PSEYPAFGQD FDTRAARFRE CVEILRAVTE HSFPLLTTQH YGQLNGELDL LPKPWSGRLP MLAVGRCGQD IKWLANHMDG WIWHQSGFNT LPEVIDHWRE SNVQKRFKPY GYATFFDLDD NKDAPMTVGR GISTGRNALI RLWERQREEG VSHVALNLKP LKRPAKEVLQ ELEEYVLPYF PTRRGNPV
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