Gene PSPTO_2729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPSPTO_2729 
Symbol 
ID1184383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePseudomonas syringae pv. tomato str. DC3000 
KingdomBacteria 
Replicon accessionNC_004578 
Strand
Start bp3027056 
End bp3027550 
Gene Length495 bp 
Protein Length164 aa 
Translation table11 
GC content58% 
IMG OID637394098 
Producthypothetical protein 
Protein accessionNP_792535 
Protein GI28869916 
COG category[S] Function unknown 
COG ID[COG3749] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGCGAA TCATTAAGAA CAACGAAGTC ATCGATGAGA CCTGGCACCT GCTGCCGAAG 
GATACGACCT TGGACAGCCT GTCCAACTGT GACGACCTGA TCGTCCCGCT GGCACTGTGG
CGCGAGCACG CGCATGCACT CAAGGCGCGT GATGGCGGGC TGGGGGTATG GCTGGACAGC
GATGAAGAAG CTGAAGAGAT TGGTGAGGAT GTCGATCAGT TTCAGGTCAT TGCCCTGAAT
TTCCCGGCAT TTACCGACGG CCGCAGTTTC TCCAATGCGC GCCTGTTGCG TGATCGCTAT
GGCTTCAAGG GTGAATTACG CGCCATTGGC GATGTGCTGC GCGACCAGTT GTTCTACATG
CGCCGCTGCG GCTTCGATGC CTTCGCTGTG CGTGCAGACA AAGACCCGTA TGACGCACTG
GAAGGCCTCA AGGACTTTTC GGTAACGTAT CAGGCAGCAA CCGACGAGCC GCTGCCGCTG
TTCCGCCGGC GCTGA
 
Protein sequence
MQRIIKNNEV IDETWHLLPK DTTLDSLSNC DDLIVPLALW REHAHALKAR DGGLGVWLDS 
DEEAEEIGED VDQFQVIALN FPAFTDGRSF SNARLLRDRY GFKGELRAIG DVLRDQLFYM
RRCGFDAFAV RADKDPYDAL EGLKDFSVTY QAATDEPLPL FRRR