Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2633 |
Symbol | |
ID | 1184285 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 2926602 |
End bp | 2927351 |
Gene Length | 750 bp |
Protein Length | 249 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 637394002 |
Product | cation ABC transporter, ATP-binding protein |
Protein accession | NP_792441 |
Protein GI | 28869822 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1121] ABC-type Mn/Zn transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.026437 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAGCGCTG CCATTGGCCT GGAAAACCTG ACCGTCGCCT ACGAGCGTCG CCCGGCGGTG CACCACATCA GCGGGCGCTT CGAAGCGGGC AGCCTGACGG CAATTGTCGG GCCGAATGGC GCGGGCAAAT CGACCCTCAT CAAAGCCATC GCCGGCACCA TGAAACCGGC TCAGGGGCAT ATCGACCGGG GCCGTCTGGC GACCCGCACG ATTGGCTACC TGCCGCAGGC CGCGGAGATC GACCGCAGCT TTCCGCTGAG TGTTGCCGAC ACGGTTTCGA TGGGTGCCTG GCACAGCATC GGGCCATTTC GCAGCCTGAC GCGCAATCAT GCTCGCCTGA CCCAAGAGGC TTTGCACACG GTCGGGCTGG AAGGGTTTGA AGCGCGCAGC GTCGGCTCGC TGTCGTCCGG GCAGTTTCAG CGTGTGCTGT TTGCGCGGCT GTTGTTGCAG GACGCCTCGG TGATCCTGCT GGACGAACCG TTTACCGCCA TCGATGCACG CACCACCCGC GACCTGCTGG AGCTGGTGCG GGTCTGGCAC GGGCAGGGCA GGACGGTGAT CGCCGTGCTG CACGATATCG AACAGGTGCG TCAGCACTTT CCGCAAACCC TGTTGATGGC CCGCGAAGCC ATTGCCTGGG GTGAGACCTC GCATGTGCTC AGCGACGCCA ACCTGCGCAA GGCGCGCAAC ATGGCTGAGT ACTGGAGCCC CGACGCCTCG CTGTGTGATG CCGAGGATGA ACGCTCATGA
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Protein sequence | MSAAIGLENL TVAYERRPAV HHISGRFEAG SLTAIVGPNG AGKSTLIKAI AGTMKPAQGH IDRGRLATRT IGYLPQAAEI DRSFPLSVAD TVSMGAWHSI GPFRSLTRNH ARLTQEALHT VGLEGFEARS VGSLSSGQFQ RVLFARLLLQ DASVILLDEP FTAIDARTTR DLLELVRVWH GQGRTVIAVL HDIEQVRQHF PQTLLMAREA IAWGETSHVL SDANLRKARN MAEYWSPDAS LCDAEDERS
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