| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2588 |
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| Symbol | |
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| ID | 1184240 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | - |
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| Start bp | 2858488 |
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| End bp | 2859525 |
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| Gene Length | 1038 bp |
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| Protein Length | 345 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637393958 |
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| Product | bacterial luciferase family protein |
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| Protein accession | NP_792397 |
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| Protein GI | 28869778 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2141] Coenzyme F420-dependent N5,N10-methylene tetrahydromethanopterin reductase and related flavin-dependent oxidoreductases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.143367 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT CATTGTTCGT GCACATGGAG CGCTGGGATG AAAGTGTCAG CCATCGCCAG
CTTTTCGAAG ACCTGACAGA ACTGACGCTG ATGGCCGAAA ACGGTGGCTT CAGTACGGTA
TGGATCGGCG AACACCATGC GATGGAATAC ACCATTTCGC CAAGCCCCAT GCCGCTGCTG
GCTTATCTGG CCGCCAGAAC CACCCGTATT CATTTAGGCG CAGGCACGAT AATCGCGCCG
TTCTGGCACC CGTTGCGGGT GGCCGGAGAA TGCGCGCTGC TGGATGTGAT CAGCAACGGG
CGCATGGAAG TCGGGCTGGC ACGCGGTGCC TACCAAGTGG AATTTGACCG GATGGCGGGC
GGCATGCCGG CCTCCGAAGG CGGCAAGGCG CTGCGCGAGA TGGTGCCGGT GGTGCGCGCT
CTGTGGCAGG GCGATTACGC CCACGATGGC GATATCTGGA AATTCCCTAC TTCGACGTGC
GTGCCAAAAC CGATTGGCAC CCCGCCGATG TGGATCGCCG CGCGCGACCC GGATTCGCAC
AATTTCGCGG TGCAGAACGG CTGCAATGTA ATGGTCACCC CGTTGATGAA GGGCGACGAG
GAAGTGGTCG ATCTGAAGAG CAAGTTCGAG GCAGCGCTGG CCAATAACCC TGACGTGCCC
CGCCCGCAAT TGATGGTGCT GCGCCATACG CATGTGCATG CGGCGGACAA TCCTGAAGGC
TGGAAAGTGG GCGCGAGCGC CATCGCGAAG TTCTACCGCA CGTTTGATGC CTGGTTTGGC
AATAAACAGA CGCCGGTGAA TGGTTTTCTT GCGCCGAGCC CTGAAGAGAA ATTCAAGGAG
CGCCCGGAGT TCGAGCTGGA GAATATCCGC AAAAATACAA TGATCGGCAC CCCGGAAGAG
ATTATTCCGC GTATTCAGTA CTATCAGGAA CTGGGTGTCG ACGAGTTCAG TTTCTGGTGC
GACAACAGTT TGCCGCACGC CGAGAAGAAG AAATCGCTTG AGTTATTTAT CAAGCACGTA
GTGCCGGCGT TTCGTTGA
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| Protein sequence | MKFSLFVHME RWDESVSHRQ LFEDLTELTL MAENGGFSTV WIGEHHAMEY TISPSPMPLL
AYLAARTTRI HLGAGTIIAP FWHPLRVAGE CALLDVISNG RMEVGLARGA YQVEFDRMAG
GMPASEGGKA LREMVPVVRA LWQGDYAHDG DIWKFPTSTC VPKPIGTPPM WIAARDPDSH
NFAVQNGCNV MVTPLMKGDE EVVDLKSKFE AALANNPDVP RPQLMVLRHT HVHAADNPEG
WKVGASAIAK FYRTFDAWFG NKQTPVNGFL APSPEEKFKE RPEFELENIR KNTMIGTPEE
IIPRIQYYQE LGVDEFSFWC DNSLPHAEKK KSLELFIKHV VPAFR
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