Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2474 |
Symbol | |
ID | 1184126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2732375 |
End bp | 2733325 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637393847 |
Product | DNA/RNA non-specific endonuclease |
Protein accession | NP_792286 |
Protein GI | 28869667 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1864] DNA/RNA endonuclease G, NUC1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.169636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCTGACA AGAAACTCAA AATCGACCTT GCCTACCGCC CCCGCCTCGC CGACCTCAAG CCTTTAAACG TGCCGGCCGC ATTGCTTGCG CAGCAACCAC AGACACTGGC TGCACCACGT ACCACCCCTG CGAGCGAACT GAAAAAGCGT CAGGGTTACG CCGAAAACTT CCTCGGAGAT TTCGTGGTGC CCTGGCCTGC GGTCGACGCC GAGCTGGCAG CCGATGTCTA TCCGCTGGAC AACACCGGCA ATCGCCTTGA TTACACGCAC TTTTCCATCA CCATGTCGCG CAGTCGACGC CTGGCGCTGT ACGTCGGCGT CAATATCGAT GGTGCCAGCA GTGTTGAGGT CAAGCGGGGC AAGGATGCGT GGTCTTTCGA CGGTAGATTG CCCGCCGAGG CGCAAATCGG TGAAAGCGTC TACGCCGACA ACTTGCTGGA TCGCGGCCAT CTGGTCAGGC GCCAAGACCC CAACTGGGGC AAGGAAGCCG AAGTGGCCAA CAGCGACACG TTTCATTTCA CCAACTGTTC GCCGCAGATG GCGGCGTTCA ATCAAAAAAC CTGGCTGGAG CTTGAGGATT ACATTCTCGA CAACACCCGT CGCTGGAAAT CCCGGGTAAC GGTGTTCAGC GGGCCGGTGC TGCGCGACGA CGACCGCAGT TACCGGAACA TAAGGGTGCC CTTGGCATTC TGGAAGGTCG TGGCGTTTGT CGGCGACGAC GGTAAGCCTT CGGCCAGCGC CTACATGATC GACCAGAGCC GCGAGCTGGG TCAGTTGGAC ATCATGTTCG GCCAGCTCAA AACCTGGCAA CGCAGCGTCT TGCAGATCGA GCAGCTCACC GGCATACATT TCGGAGCGCT GGCTGGCTAC GACGGTTTCT CCAACGAAGA ACGCCTGACC GGCACGCGAA TCGAAGCACG GATACGCGGG CCGCAGGATA TTCGCGTCTA G
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Protein sequence | MPDKKLKIDL AYRPRLADLK PLNVPAALLA QQPQTLAAPR TTPASELKKR QGYAENFLGD FVVPWPAVDA ELAADVYPLD NTGNRLDYTH FSITMSRSRR LALYVGVNID GASSVEVKRG KDAWSFDGRL PAEAQIGESV YADNLLDRGH LVRRQDPNWG KEAEVANSDT FHFTNCSPQM AAFNQKTWLE LEDYILDNTR RWKSRVTVFS GPVLRDDDRS YRNIRVPLAF WKVVAFVGDD GKPSASAYMI DQSRELGQLD IMFGQLKTWQ RSVLQIEQLT GIHFGALAGY DGFSNEERLT GTRIEARIRG PQDIRV
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