Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_2255 |
Symbol | |
ID | 1183906 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | - |
Start bp | 2498021 |
End bp | 2498857 |
Gene Length | 837 bp |
Protein Length | 278 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637393635 |
Product | hydrolase, TatD family |
Protein accession | NP_792075 |
Protein GI | 28869456 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0084] Mg-dependent DNase |
TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.481598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAACTCA TCGACATCGG CGTCAATCTG ACCAACGCAA GCTTCGCCTC GCAGCGACAG GCGGTACTCG ACCGCGCCTA TGCCGCAGGC GTCGATCAAC TGGTGGTCAC CGGCACCAGT GTCGAAGGCA GCGAACAAGC CTTGCAGCTG TGTCACGAAC TCGATGAAAG CGCGCAACGC CTGTTTTGTA CCGCAGGCAT CCACCCGCAC TCAGCGAGCG ATTGGACCGG CGACACCGAG AAACAGTTGC ATGCCCTGCT CAAGGAAAAT CGCGTGCGTG CCGTGGGTGA ATGCGGGCTG GATTTCAACC GTGACTTCTC CCCTCGCCCT CAGCAGGAAA AGGTGCTTGA AGCGCACCTG GTCATGGCCG TGGAACTGCA ACTGCCCGTC TTTCTCCACG AGCGCGATGC CAATCAGCGT CTGCTGGACA TTCTGCGCGA CTACCGCGAC CGCCTGCCTG CGGCCGTGGT GCATTGCTTC ACCGGGGAGC GGACGGCGCT GTTCAGCTAC CTGGACCTGG ACCTGCACAT TGGCATCACC GGCTGGATCT GCGACGAACG GCGTGGCACT CACCTGCATG CGCTGGTGGG CAACATCCCG CGCGGTCGAT TGATGCTGGA AAGTGATGCG CCCTATCTGC TGCCTCGCAG CCTGCGCCCC AAGCCGAAAA ATGGTCGCAA CGAGCCCGCC TATCTGCCGG AAGTATTGCG CGAAGTGGCG TTGCACCGGG GCGAAAGTCA GGAAGACCTG GCGCGTCATA GCACGGCCTG CGCACGGGCG TTTTTCGACC TGCCGACCGT GCAACAGACA GAGGAAGAAA ATCTGCAGCT TTGTTGA
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Protein sequence | MQLIDIGVNL TNASFASQRQ AVLDRAYAAG VDQLVVTGTS VEGSEQALQL CHELDESAQR LFCTAGIHPH SASDWTGDTE KQLHALLKEN RVRAVGECGL DFNRDFSPRP QQEKVLEAHL VMAVELQLPV FLHERDANQR LLDILRDYRD RLPAAVVHCF TGERTALFSY LDLDLHIGIT GWICDERRGT HLHALVGNIP RGRLMLESDA PYLLPRSLRP KPKNGRNEPA YLPEVLREVA LHRGESQEDL ARHSTACARA FFDLPTVQQT EEENLQLC
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