| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_2232 |
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| Symbol | |
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| ID | 1183883 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 2464986 |
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| End bp | 2466809 |
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| Gene Length | 1824 bp |
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| Protein Length | 607 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 637393613 |
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| Product | hypothetical protein |
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| Protein accession | NP_792053 |
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| Protein GI | 28869434 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.603835 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCATTGG ACGTAAAACC CTCTCTACAG TTGGACCTGC CGCCGCCCGA GGTTCCCTAC
CTGAAGCAGC CGGAGAATTA CCTCGACCTT GATCAGTTGA TGGGTCAGGC ATTGGAGACC
TGGATCAATT ATCCGGGAAT GCGTGTGGGA GATCGTTTGT TTCCCAATTG GCGGGGTTGC
GGTTTGCAGG GTCAGTTGGT GGATTTCTTC GAAGACCTCG TGGTGGTCGA GGAGGATAAT
CCCAAGGGTG TGGCTGTAAT CATTCTCAAC CAGCCTCTGC ACGAACTCGA TCAGGGGTGG
GTGTTTTATT CGTATCAGCT GTATGACCCC AACGTACAGG GTAATCGCGG CGAAGAGTCG
TTGAGAATAT TTTTCAACGT CGGTAAACGG CCCGCTTTAT CTGGCGGGTT GGGGGCGCCG
CAATGCAAGG AGTCGCACGA TCTCAAGCTT GATCCAGAGC TGTTGGAACT GGGTGGAGAA
GTCCTGTTTG TGACGCCGCC GTATCACGCC ATGCGCATGG GTGACACGAT CACCCTGACG
CTGGACTTGT TTTTTGGCGA AAATGATCCG TTTCAACCCT TGTCGCAATC GAAGACCCTG
ACCAATAGCG ATGTAGGACT GCCTGTGCAG TGGCGCGTGA CGGCTAGCGA TCTGCTTCAG
ATTGAAGGTG GCTATGTGCT GATGAGCTAT AGCGTTACCT ACGCTGGCAC CTCAATAACC
AGCCAGTCAT CCATTCAGAC CCTCGATATC GTCGAGCATG ATGACGATTT GTTGCCAGCA
CTGACGATCA AGGATTTCAG CGGTGGCTCG CTGGATCCGG GCGCCTACCC CGATGGCATA
ACGCTGATAG TCGGGCCCTA TCCGGGTATG GAGGTCAATG ACGACGTCAT GCTTTACGTC
AGCGGCGACA CTCGGGTAGC GCAGTCACTG AGGGCTGACC TGTCGAGCGT TGAAAGTGGC
ATTGTGCAGT TCCGGCTAGC CTCGTCCTGG CTAATCGCCA ATAACGGCAG GCAAGTAGAA
TTCATGTACG AATATGCCCG TTTGGGCGAA GCGAAGAGGT CGTTGTCGCG CGATGTCATT
CTGCGGCGGC CTCTCGATCT TCCAGCGCCC GTTATCAAAG ACGCGATCAT TGATGAACCC
GGTGACACGA TGGTCAAGGG GCATATATTT GCCCGGCAAC TGACGCAGGG TGTGACGATC
AGCATACCCA AAGAGGCCTT CATCGGTGCA GGAGATCAGG TGCAGATGTA CTGGGATGGC
CACGGGAGCA CTGGCCGTTT CATTGCCGAC CCTTCGCCGA ACGACTCCCG GATGTTCCAT
ATCCCGCCCG AGGCGGTGCC TGCCAACATG GGTAAACGCC TGGACGTGTA TTACAAAGTC
ACGCCGGTGC TCGAACCCGC AGGGACCTCC AGAGTGTTCA ATCTGGAAGT GAGGAAGTTA
GACGGTGGCT GGCCGTTCAT CCAGTTCGTG AACCCTCCTG TTTTGGATGC GCGGCTTTCA
CTCGCCAAGG TACCTCCAGG TGGTGCCGGT CTGGAACTGC CTGGCTGGGT CTACATGGCA
CCGGGGCAGC GAGTAAGAAT AAAGGCTGTC GGACTGCTGC AGTCATCTGG CACGGCGCTG
ACGCTGGGCC TTCGCATCGG CGTAGCGGAG CCGGTTACCG AGGCTGAGTA TCAGGCCCGG
CGCGTGCCGG TGAGCATTCC AAGAGAGTTT CTGGAGCGCT TGCAAAGAAA CAGTGAAACC
AACAGCGTGA CCGTTGATGT CAGCTTCGAT GACGGCCTGA GTTACACCCA ATTTCCGCCC
ATTACTTTTA CCTTGGTGGA CTAG
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| Protein sequence | MALDVKPSLQ LDLPPPEVPY LKQPENYLDL DQLMGQALET WINYPGMRVG DRLFPNWRGC
GLQGQLVDFF EDLVVVEEDN PKGVAVIILN QPLHELDQGW VFYSYQLYDP NVQGNRGEES
LRIFFNVGKR PALSGGLGAP QCKESHDLKL DPELLELGGE VLFVTPPYHA MRMGDTITLT
LDLFFGENDP FQPLSQSKTL TNSDVGLPVQ WRVTASDLLQ IEGGYVLMSY SVTYAGTSIT
SQSSIQTLDI VEHDDDLLPA LTIKDFSGGS LDPGAYPDGI TLIVGPYPGM EVNDDVMLYV
SGDTRVAQSL RADLSSVESG IVQFRLASSW LIANNGRQVE FMYEYARLGE AKRSLSRDVI
LRRPLDLPAP VIKDAIIDEP GDTMVKGHIF ARQLTQGVTI SIPKEAFIGA GDQVQMYWDG
HGSTGRFIAD PSPNDSRMFH IPPEAVPANM GKRLDVYYKV TPVLEPAGTS RVFNLEVRKL
DGGWPFIQFV NPPVLDARLS LAKVPPGGAG LELPGWVYMA PGQRVRIKAV GLLQSSGTAL
TLGLRIGVAE PVTEAEYQAR RVPVSIPREF LERLQRNSET NSVTVDVSFD DGLSYTQFPP
ITFTLVD
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