Gene PSPTO_1780 details

Gene Information

• Locus tag: PSPTO_1780
• ID: 1183417
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: +
• Start bp: 1950147
• End bp: 1950542
• Gene Length: 396 bp
• Protein Length: 131 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 637393152
• Product: PilB-related protein
• Protein accession: NP_791605
• Protein GI: 28868986
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0229] Conserved domain frequently associated with peptide methionine sulfoxide reductase
• TIGRFAM ID: [TIGR00357] methionine-R-sulfoxide reductase

Plasmid Coverage information

• Num covering plasmid clones: 20
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGACAAGT TGCAGAAAAC GCTCGAAGAG TGGAAAGAAA TGCTCGACCC GGCGCAGTAC 
AGCGTTTGCC GCCTCAAAGG CACCGAGCGA CCGTTTTCCG GCAAGTACAA CGATACGAAA 
ACAGCGGGCG TCTACCATTG CATCTGTTGC AACGAGGCGC TGTTCGACTC CACCACCAAG 
TTCGATTCGG GCTGCGGCTG GCCGAGCTTC TACGCCCCGC TGGAAGGCAG TGCGGTGGTC 
GAAGTGCGTG ATGTCAGCCA CGGAATGATT CGCACCGAAG TGGTCTGCGC CCGATGCGAC 
GCCCACCTGG GGCACGTGTT TCCCGATGGT CCGCCACCCA CCGGGCTGCG TTACTGCATC 
AATTCGGTAT GCCTGGAACT GGTGCCACGC GAGTAG 

 

Protein sequence

MDKLQKTLEE WKEMLDPAQY SVCRLKGTER PFSGKYNDTK TAGVYHCICC NEALFDSTTK 
FDSGCGWPSF YAPLEGSAVV EVRDVSHGMI RTEVVCARCD AHLGHVFPDG PPPTGLRYCI 
NSVCLELVPR E