Gene PSPTO_1633 details

Gene Information

• Locus tag: PSPTO_1633
• Symbol: asnB
• ID: 1183270
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pseudomonas syringae pv. tomato str. DC3000
• Kingdom: Bacteria
• Replicon accession: NC_004578
• Strand: -
• Start bp: 1788407
• End bp: 1790179
• Gene Length: 1773 bp
• Protein Length: 590 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 637393005
• Product: asparagine synthetase, glutamine-hydrolyzing
• Protein accession: NP_791458
• Protein GI: 28868839
• COG category: [E] Amino acid transport and metabolism
• COG ID: [COG0367] Asparagine synthase (glutamine-hydrolyzing)
• TIGRFAM ID: [TIGR01536] asparagine synthase (glutamine-hydrolyzing); [TIGR03104] asparagine synthase family amidotransferase

Plasmid Coverage information

• Num covering plasmid clones: 13
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTGCGGAT TAGCAGGTGA ACTTCGTTTC GACCATCAAC CAGCGGACCT CGCCGCAGTT 
GAGCGTATTA CCCATGAGCT GGCGCCTCGC GGCCCGGATG CGTGGGGGTT TCATAGCCAG 
GGGCCGATTG CCCTTGGTCA CCGCCGTCTG AAAATCATGG ACCTGTCGGA TGGCTCGGCG 
CAGCCGATGA TCGACAGCAA CCTTGGCCTG TCGATGGCCT TCAACGGTGC GATCTACAAC 
TTCCCCGAAT TGCGTGCCGA GTTGGAAAGC CTTGGCTATC AGTTCCATTC CGGTGGCGAC 
ACCGAGGTAT TGCTCAAGGG CTACCACGCG TGGGGCGCAG AGATGCTGCC CAAGCTCAAT 
GGCATGTTTG CCTTTGCCAT CTGGGAGCGC GACAGCAAGC AGCTGTTCAT TGCCCGTGAC 
CGCCTCGGTG TAAAGCCGTT GTACCTGTCG AAAACCGATA AGCGCCTGCG CTTCGCGTCC 
TCGCTGCCTG CCCTGCTCAA GGGCGGTGAT ATCAGCGGGA TGCTTGATCC GGTGGCGCTC 
AATCATTACC TCAACTTCCA TGCTGTGGTG CCTGCACCGC GTACGCTGCT GGCCGGCGTC 
GAGAAGTTGC CGCCTGCCAG CTGGATGCGC ATTGACGCCA GCGGCAAGGT CGAGCAGAAA 
GTCTGGTGGA CCCTGCCTTA TGGTCCCCAC GAGGACGAGA AAAATCTCAC TCTGGAAGAC 
TGGCGCGACC GTGTACTGGA CAGCACCCGC GAAGCGGTGG CCATTCGTCA GCGTGCTGCG 
GTAGACGTAG GCGTGCTGCT TTCGGGCGGT GTCGATTCGA GCATGCTGGT CGGCCTGCTA 
CGCGAAGTGG GTGTCGAGGA CCTGTCAACC TTCTCCATCG GCTTCCAGGA TGCTGGCGGC 
GAACGTGGCG ATGAATTTCA ATATTCGGAC CTGATCGCCA AGCATTACGG TACGCGTCAC 
CATCAGTTGC GCATTCAGGA AAGCGAGATC ATCGAGCAGT TGCCTGCGGC GTTCCGCGCC 
ATGAGCGAAC CAATGGTCAG CCACGACTGC ATCGCCTTTT ATCTGCTGTC GCGCGAAGTG 
GCCAAGCACT GCAAGGTCGT GCAGAGCGGC CAGGGCGCTG ACGAGCTGTT TGCCGGTTAT 
CACTGGTACC CGCAAGTCGA TGGCGCAAGC GACCCGGTCG CGGCCTACCG TTACGCCTTT 
GTGGACCGCA GCTACGCCGA ATACGCGGAC ACTGTTCAGC CAAAATGGCG CACCGCCAAC 
GATGCAGCCG GTGACTTCGT TCGCGATCAC TTCGCCCAGC CGGGTGCCAG CGCTGCGGTT 
GACAAGGCGC TGCGTCTGGA CAGCACAGTG ATGCTGGTCG ATGACCCGGT CAAACGTGTC 
GACAACATGA CCATGGCCTG GGGCCTGGAA GCGCGCACGC CGTTTCTCGA CTATCGTCTG 
GTCGAGCTGT CGGCGCGTAT TCCGGGCAAG TTCAAGCTGC CCGATGGCGG CAAGCAAGTG 
CTGAAAGAAG CGGCGCGGCT GGTCATTCCA TCAGAAGTGA TCGACCGCAA GAAGGGCTAT 
TTCCCTGTGC CCGGCCTCAA GCATTTGCAG GGCGATACAC TCAATTGGGT ACGTGAACTG 
CTGACCGATC CGAGCCAGGA CCGCGGCCTG TTCAACCCGA CCATGGTCGA CAAGCTGCTG 
ACCAATCCCG AAGGCCAGCT CACGCCGCTG CGCGGCTCCA AGTTGTGGCA GTTGGCCGCG 
CTGAACCTGT GGCTCAGCGA ACAAGGACTG TGA 

 

Protein sequence

MCGLAGELRF DHQPADLAAV ERITHELAPR GPDAWGFHSQ GPIALGHRRL KIMDLSDGSA 
QPMIDSNLGL SMAFNGAIYN FPELRAELES LGYQFHSGGD TEVLLKGYHA WGAEMLPKLN 
GMFAFAIWER DSKQLFIARD RLGVKPLYLS KTDKRLRFAS SLPALLKGGD ISGMLDPVAL 
NHYLNFHAVV PAPRTLLAGV EKLPPASWMR IDASGKVEQK VWWTLPYGPH EDEKNLTLED 
WRDRVLDSTR EAVAIRQRAA VDVGVLLSGG VDSSMLVGLL REVGVEDLST FSIGFQDAGG 
ERGDEFQYSD LIAKHYGTRH HQLRIQESEI IEQLPAAFRA MSEPMVSHDC IAFYLLSREV 
AKHCKVVQSG QGADELFAGY HWYPQVDGAS DPVAAYRYAF VDRSYAEYAD TVQPKWRTAN 
DAAGDFVRDH FAQPGASAAV DKALRLDSTV MLVDDPVKRV DNMTMAWGLE ARTPFLDYRL 
VELSARIPGK FKLPDGGKQV LKEAARLVIP SEVIDRKKGY FPVPGLKHLQ GDTLNWVREL 
LTDPSQDRGL FNPTMVDKLL TNPEGQLTPL RGSKLWQLAA LNLWLSEQGL