| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPTO_1618 |
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| Symbol | |
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| ID | 1183255 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_004578 |
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| Strand | + |
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| Start bp | 1774328 |
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| End bp | 1775236 |
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| Gene Length | 909 bp |
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| Protein Length | 302 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637392990 |
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| Product | transcriptional regulator, LysR family |
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| Protein accession | NP_791443 |
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| Protein GI | 28868824 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGCTGTCTA CCGATCGTTT GAAAGGCATC GAAACCTTCG TCGCCGTTGC CAGCGCAGGC
AGTTTTACCG CAGCCGCCGA ACGTCTGAGC CTGACCAATT CGGCGGTTAG CAAAAGTGTT
TCGCGCCTGG AGAGCCGCTT GGGCATGCGC CTGTTCGAGC GCACCACGCG AAGCCTGGCG
CTGACCGAGG AGGGTGTGGC TTATCACGCG GTGTGCACGC GCATGCTGGC CGAACTTGAG
GCGGCTGAAA CCGCACTTGC CGCTCAGCGT TCCGAGCCAG CCGGGCAGTT ACGCATCGAC
CTGCCTGCCA CGTTTGGCCG CCTGCATGTG TTGCCATTGA TTCTCGACTT TGCCGGGCAG
CATCACAAAT TGCGTCCGCG GGTGACGTTC ACCGACCGAT TCGTCGATAT TCTCGAGGAG
GGCATCGATC TCGCCGTGCG CATCGGCGGC CCGCTCATCT GGCCAGCAGG CGTGGCGCAC
CGTTACCTGG GCACTGAACG GGTGATCTTC TGCGCGGCGC CGGCTTATCT GCAACGGCAT
GGCACACCGA CGACGTTCGA GGACCTTGCC CGTCACGCCT GTATTCTGTT TGGCCGAGGC
GATGGCAGCA CCAGCCCGTG GCTATTTGTC GATGAACAGG GGCAGCAAGA GGCGCGCGCG
ATCGAGGCAC GGCTGGTGAT CGGCAATGGT GAAGCCCAGG TCGCTGCGGT GACATCGGCA
TGGGGCATTG CCCAACTGGC GACCTGGTTG ATCAAGGATC AGTTGCAGCG TGGCGAGCTG
GTGGAGATTC TTCCACAGCT CGCCACCGAA GGCCTGGCCC TGCACCTGGC CTGGCCGCGC
AACCGCGAGT CATTGTCCAA GGTGCAGGCT CTGGTTGAGC GGTTGTCCGG CGTGTTACGG
GTGGATTGA
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| Protein sequence | MLSTDRLKGI ETFVAVASAG SFTAAAERLS LTNSAVSKSV SRLESRLGMR LFERTTRSLA
LTEEGVAYHA VCTRMLAELE AAETALAAQR SEPAGQLRID LPATFGRLHV LPLILDFAGQ
HHKLRPRVTF TDRFVDILEE GIDLAVRIGG PLIWPAGVAH RYLGTERVIF CAAPAYLQRH
GTPTTFEDLA RHACILFGRG DGSTSPWLFV DEQGQQEARA IEARLVIGNG EAQVAAVTSA
WGIAQLATWL IKDQLQRGEL VEILPQLATE GLALHLAWPR NRESLSKVQA LVERLSGVLR
VD
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