Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1604 |
Symbol | |
ID | 1183241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1758790 |
End bp | 1759611 |
Gene Length | 822 bp |
Protein Length | 273 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637392976 |
Product | hydrolase, putative |
Protein accession | NP_791429 |
Protein GI | 28868810 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.626551 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTCC AACAGCGCAA TAACGTCAAC ATCATGGGCG ATGGACCGGC CACTCTGATT TTTGCTCATG GATTTGGCTG CGATCAGCAC ATGTGGCGTT TTATGGCGCC TCACTTTGCC GAGCGCTTCA AGGTTGTGCT CTTTGACCTG GTGGGCAGCG GCAACTCCGA TGTGTCGGCC TGGTACCCGC ACAAATACGC CTCGCTCAAG GGCTACGCCA CTGACTTGCT GGAACTGGCC GACGAGTTCG CCGGAACCGG GCCGGTGGTG CATATCGGTC ACTCGGTCAG TTGCATGATC GCCGTGCTCG CCGAGCTTCA GTCGCCAAGC CGGTTCGACA GCCACATCAT GGTCGGTCCT TCGCCTCACT ACCTCAACGA CGGCGATTAC CTGGGCGGTT TTACCCGCGC TGACGTGGAC TCGCTGCTGG AAACCCTGGA AAGCAATTAC CTGGGCTGGG CCAGCACCAT GGCGCCGACG TTGATGGGGG CTGGCGACCG GCCGGAACTG AGCGAAGAAC TCGCCAGCAG TTTTTGTCGC ACCAATGCCG AAATCGCCAA GCAGTTTGCT CGCGTGACGT TCCTCTCCGA CCATCGTGCC GATGTTGCGC GATTCAACAG CAGGACGCTC ATTTTGCAAA GCAGCGACGA TCTGGTCGTG CCAGTGCAGG TCGGCGAGTA TCTGCACCAT GTGATCGCCG ACAGCGCCTT GCACATGATC GACAACGTCG GGCATTACCC GCACATGAGT GCGCCGCAAG AGTGTATTAC GGCCATGAAT CTGTTTCTGG CACCTTACGA GAGCCCTGAT CATGCTGCTT GA
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Protein sequence | MSVQQRNNVN IMGDGPATLI FAHGFGCDQH MWRFMAPHFA ERFKVVLFDL VGSGNSDVSA WYPHKYASLK GYATDLLELA DEFAGTGPVV HIGHSVSCMI AVLAELQSPS RFDSHIMVGP SPHYLNDGDY LGGFTRADVD SLLETLESNY LGWASTMAPT LMGAGDRPEL SEELASSFCR TNAEIAKQFA RVTFLSDHRA DVARFNSRTL ILQSSDDLVV PVQVGEYLHH VIADSALHMI DNVGHYPHMS APQECITAMN LFLAPYESPD HAA
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