Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | PSPTO_1088 |
Symbol | |
ID | 1182723 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pseudomonas syringae pv. tomato str. DC3000 |
Kingdom | Bacteria |
Replicon accession | NC_004578 |
Strand | + |
Start bp | 1194524 |
End bp | 1195576 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637392466 |
Product | hypothetical protein |
Protein accession | NP_790922 |
Protein GI | 28868303 |
COG category | [S] Function unknown |
COG ID | [COG4804] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.503621 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCCAT CGAGGAATCC CGCACTGCCC GAGGGCTACG CCGACTGGCT GACTCAGCTT AAAGGCGATA TCACTCAGGC CCGACAACGC GCCGCCTTAG CGGTCAATGC CGAGTTGGTG CAGCTTTATC ACCGCCTCGG CGGCGAAATT CGACAACGCC AGGAAGCGCA GGGCTGGGGT GCCAAGGTTA TCGAGCGTCT GGCCCGCGAC CTCACCGAGT CCTTTCCCGA GATCCGCGGC TTTTCCGGCC GCAACCTCAA GTACATGGCG TTTTTCGCCG AGCACTGCCC GGAGGGTCAA TTTGGGCAGC AGGCTGCTGC CCAATTGCCC TGGTTCCATG TGGTGACCCT GCTGACCAAG CTGGACAGTC CTGCCGAGCG TGAATGGTAT GCGCAGCAAA CCGTGCTGCA TGGCTGGTCA CGCAGCACGT TGGAGCTGAA TATCAAGAGT CGCCTGCAGC AACGGCAAGG CTCAGCGGTC ACCAACTTTG TAACCCGCCT GCCAGCCGCT GAATCGGCTT TGGCACAGGA AACCCTGAAA GATCCCTACC TGTTCGATTT TCTGGGTCTG GGCCATGATG CCCAGGAGCG CGAGATCGAA GCCGGACTGA TCCGTCATAT CACGCGTTTC TTGCTGGAAT TGGGTGCTGG TTTTGCTTTC GTCGGCCGCC AGTTTCGTTT GGAAGTTGGG GGTGATGAGT TCTTCATCGA CCTGCTGTTC TATCACACCC GACTCAAGTG CTACGTGGTG GTAGAGCTCA AGGCCACGGC CTTTAAACCC GAACATGCTG GCCAGCTGAA TTTCTACCTG GCAGCGGTGG ATGCGCAGGT CAAAACTGAA GACGACAAGC CTACTATCGG GCTGCTGCTG TGCAAGCAGC AGAACCGCCT GGTGGCCGAG TACGCGCTAT CCGGTATCGA CAAACCTATC GGCGTCGCCG AATACCAACT CTTACGCGAT TTGCCCGAAA CCTTGGGCCG CAGCCTGCCA AGCATTGCCG AAATCGAGGC GGAGCTGGCT GGGGAACTGG ACACAGGAAG TGAACTGGAA TGA
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Protein sequence | MSPSRNPALP EGYADWLTQL KGDITQARQR AALAVNAELV QLYHRLGGEI RQRQEAQGWG AKVIERLARD LTESFPEIRG FSGRNLKYMA FFAEHCPEGQ FGQQAAAQLP WFHVVTLLTK LDSPAEREWY AQQTVLHGWS RSTLELNIKS RLQQRQGSAV TNFVTRLPAA ESALAQETLK DPYLFDFLGL GHDAQEREIE AGLIRHITRF LLELGAGFAF VGRQFRLEVG GDEFFIDLLF YHTRLKCYVV VELKATAFKP EHAGQLNFYL AAVDAQVKTE DDKPTIGLLL CKQQNRLVAE YALSGIDKPI GVAEYQLLRD LPETLGRSLP SIAEIEAELA GELDTGSELE
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