| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_5737 |
|---|
| Symbol | |
|---|
| ID | 5358237 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | - |
|---|
| Start bp | 5912481 |
|---|
| End bp | 5913902 |
|---|
| Gene Length | 1422 bp |
|---|
| Protein Length | 473 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 640814782 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001351056 |
|---|
| Protein GI | 152986378 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2120] Uncharacterized proteins, LmbE homologs |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCGCGC GCAAACAGCA ATTGCTCAAG CGTCATCGGC GCAACAAGCG GATCGGCCTG
CTGCTGGCGA TGCTGGTGGC GCTGGCCGTC GGCGTTCTGG TCAGCCCCTG GTTGCTGCCG
GTTCTCCTGC CGTGCCTGTG GATCGCCCAT GAGGCCTGGT TCGCCGATCA CCTGTTCTAT
TCGCCTGGCG AGGACTATCG CTACCGTTTC GATGAGCGGG TCGAGGCCCT GCCGGTGCGC
GCGCTGGACG GCGGCAGGCT ACAGGTGGAT GGCGAGCTGC GTGCGGACGA TACGCTGTTG
CTCGGCATTG CCGTGCGTGC CGGCTGGCTG GGACGTTTTC TCGAGCCGGC GGTGCTGATC
GAGGGTGGCG CGCAGGTCGA TGCGCAGGCT TTCGAGCGTG GCGTGAACGG CCTGCGCTAC
CTGAACCTGA CGGGACTGGC CGAAGCACTG GCCGCAGGCC GGATACGCCT GCGCGGCCGG
CATTGCCGGC TGCTCGGCGA GCCGAGCCTG TGGCGCGCGC GGCATCCCGA CTACCGCGCG
CGGCGGGTGA TGGTCATCGC ACCGCACGCC GACGATGCCG AACTGGCCGC CTTCGGCCTG
TACAGCCAGG CCCGCGAGGC CTGGATCGTG ACCCTGACCG CCGGCGAGAT CGAGACCGAA
CACTTCCGGC GCATGGGGCT GGACGGGGTC GCCGCGGCGC GACTCAAGGG CCGCCTGCGC
GCCTGGGACA GCCAGGCCGT ACCGGCCTGG GGCGGCGTGC CCGCCGAGCG TTGCGTGCAA
CTGGGCTATT TCTGCCTGCA ACTGCCGGCG ATGCAGGCCG AGCCGGAGGC CGTGGTGCCT
TCGCGCGAGG CCGGCCTGAG CGATACCCGC CCGTTCCGCC AGTTCAATCG CCTGCGCCTG
GCCAGCGATG CCGACGGTCT GTCCACCTGG CGCAACCTGC TGGCCGACCT GCGCGAACTT
ATCCTGCTGG CGCGACCCGA GGTCATCGTC CTGCCGCATC CGCATTTCGA CCCGCATCCG
GACCATGTGC GCGCCCAGCA GGCCGTGCGC GAGGCGCTGC AGGGCCTGGA CTGGCAACCG
CGGACGCTGC TGCACTATGC CAACCACCTG CATGACAACG ATCGCTGGCC GATGGGCGAT
GCGCACATGG GCGTCAGCCT GCCGCCGCTG ACCGAAGAGT GTCCGCCGCT GCTGCCCTGG
ACGCTGCCGC TGGAGCCGGC GCGCCAGGTG GACAAGGCCA TGGCGCTGGG CATGATGCAC
GACCTGCAGC CCCGCCCACC GTTCAAGCGT CGCCTGCGTC GGCGCCTGCA AGGCTGGCTC
GCCGGGCGCC GCTGGCCGGC CTATGGCGAG GACGAGTTCA TGCGCAAGGC GGTGCGGCGG
CAGGAACTGT TCTGGGTGGA GTCACTGGAT GGTGATGCAT GA
|
|---|
| Protein sequence | MSARKQQLLK RHRRNKRIGL LLAMLVALAV GVLVSPWLLP VLLPCLWIAH EAWFADHLFY
SPGEDYRYRF DERVEALPVR ALDGGRLQVD GELRADDTLL LGIAVRAGWL GRFLEPAVLI
EGGAQVDAQA FERGVNGLRY LNLTGLAEAL AAGRIRLRGR HCRLLGEPSL WRARHPDYRA
RRVMVIAPHA DDAELAAFGL YSQAREAWIV TLTAGEIETE HFRRMGLDGV AAARLKGRLR
AWDSQAVPAW GGVPAERCVQ LGYFCLQLPA MQAEPEAVVP SREAGLSDTR PFRQFNRLRL
ASDADGLSTW RNLLADLREL ILLARPEVIV LPHPHFDPHP DHVRAQQAVR EALQGLDWQP
RTLLHYANHL HDNDRWPMGD AHMGVSLPPL TEECPPLLPW TLPLEPARQV DKAMALGMMH
DLQPRPPFKR RLRRRLQGWL AGRRWPAYGE DEFMRKAVRR QELFWVESLD GDA
|
|---|
| |