7 homologs were found in PanDaTox collection
for query gene PSPA7_5525 on replicon NC_009656
Organism: Pseudomonas aeruginosa PA7



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009656  PSPA7_5525  tRNA-Sec  100 
 
 
96 bp  190  4e-47  Pseudomonas aeruginosa PA7  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_63460  tRNA-Sec  100 
 
 
92 bp  182  1e-44  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  normal  normal 
 
 
-
 
NC_010501  PputW619_R0002  tRNA-Sec  90.62 
 
 
96 bp  119  9.999999999999999e-26  Pseudomonas putida W619  Bacteria  normal  normal  0.114586 
 
 
-
 
NC_008686  Pden_R0051  tRNA-Sec  85.92 
 
 
92 bp  61.9  0.00000003  Paracoccus denitrificans PD1222  Bacteria  normal  0.0506501  normal 
 
 
-
 
NC_009720  Xaut_R0005  tRNA-Sec  87.93 
 
 
92 bp  60  0.0000001  Xanthobacter autotrophicus Py2  Bacteria  normal  0.491433  normal 
 
 
-
 
NC_009832  Spro_R0001  tRNA-Sec  86.57 
 
 
91 bp  54  0.000006  Serratia proteamaculans 568  Bacteria  normal  normal 
 
 
-
 
NC_009668  Oant_R0052  tRNA-Sec  84.29 
 
 
92 bp  52  0.00002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
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