| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_4412 |
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| Symbol | |
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| ID | 5357988 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas aeruginosa PA7 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009656 |
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| Strand | - |
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| Start bp | 4544571 |
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| End bp | 4546100 |
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| Gene Length | 1530 bp |
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| Protein Length | 509 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640813460 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_001349763 |
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| Protein GI | 152985691 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.673071 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACG CGTTCCTCGA GTTTGACCTT ATCGTCGTTG GTGGTGGTTC GGCGGGTGCA
GTTCTAGCGT CGCGCCTGAG TGAAACCCCT GGGTTCCGTG TGCTGCTCAT CGAGGCAGGT
CACCACTACG GCTCTCATGA GTTCCCAGAC CGACTCGCAT CGGTAGATTC GGTCGGCGGC
GACGCCGAGC ATCGATGGCC GCCGACACGG GATGTCGCCC GGGGGCGCCC GACTGGAGGG
TTGCGAGCAA AGGTGATCGG CGGGGGCTCA ACGATCAACG CTGGCGCATT TGTGCGTGCA
CCACGAGCCG ATTTCACGCG ATGGACGGAA CATGGACTGA AGGGGTGGGC GTATGGTGAC
GTACTGCCTT TCTATAAAAA ATGCGAATCT TCCGATTATG GCGATGATGC GCTTCATGGT
CGTGACGGAC CGATTCCCGT TCATTTGCGC ACCCTGGATG AACTGACTCG AGATGCGCGC
GAGTTCATTG CGGCGGCGCA ATTCGCCGGT TTCCCTTATG TCGATGACGC GAATGGGCCC
TCTTCGTTTG GAGTCTCCAT TTATCCGGCC AATGTTCGCG ACGGCGTGCG GATAAACACC
GCCATGGCAT ATCTCGGTCG CGAAGTGGTT GCGCGCGAAA ATCTCACGCT TGTCGCTGAC
GCCAGCGTCG ATGTCCTGTT GTTTGCAGGC AAGCGCGTGG TCGGTGTCAG GCTAGCCGAC
GGCAGAGAGT TTCGCGGTCG TCAAGTTGCG CTTGCGGCTG GTGCGGTTGG CAGTGCGGCA
GTGCTGATTC GCTCAGGCAT TGGGCCGCGA GCGAAGCTCG AACGACTTGG GATTCCACTT
GTAGAAGACT TGCCGGTGGG GCAGGCGCTG ATGGATCAGC CGCATGTCTA CTTGCAGGTT
GTGACACGCG ATGGAGGTGA GCGGACGCCA GCGGTGGGCG GCAAGGTGTG GGGACGTTCG
CCACTCGCAA CGGGAGAGGA ACTCGATTTC TACCTTGGCT TCAATCATTA CGCGGACGAG
TCAGTCGCGT CCTCCGGACA TGCGTTCGGA GTCATAGTAT GCGCCTGTCA TGTGGAGTCT
CGTGGAACGA TGGAATTGCT TGCCCGTCAT CCTGATGCGG AAATCGATGT TGCACTGAAC
CTGCTTCAAG TACCGAACGA TACCGTCCGG CTGATGGCGG GCATCGAGGC TGCATTGCGT
GTGGTACGCC AGGCTCCTTT GATCGAGCGC GTGGAGAGTG TGACGTTCCG CGACGGGACC
CCGGTGCCGG ACGATCCGGA TGTTCTGCGT GCAGCTTTAC AGCAACATGT GGAACCCACC
CTGCACATCA CATCAACGGC GCCAATGGGG GCCGCGCGCG ACGGTCTCAG CGTGACGAAC
TGCGAAGGCA TGGTGTGGGG AGTCGAAGGA CTGCGTATCG TGGATGCGTC AATCTATCCA
GAGACACCTT CCGTGGCGAC GAACCCGACT GTAATCATGG GAGCTGAATA CTTGGCACAC
AAGATCACCG TATCGGAGCA GCGACGCTGA
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| Protein sequence | MKNAFLEFDL IVVGGGSAGA VLASRLSETP GFRVLLIEAG HHYGSHEFPD RLASVDSVGG
DAEHRWPPTR DVARGRPTGG LRAKVIGGGS TINAGAFVRA PRADFTRWTE HGLKGWAYGD
VLPFYKKCES SDYGDDALHG RDGPIPVHLR TLDELTRDAR EFIAAAQFAG FPYVDDANGP
SSFGVSIYPA NVRDGVRINT AMAYLGREVV ARENLTLVAD ASVDVLLFAG KRVVGVRLAD
GREFRGRQVA LAAGAVGSAA VLIRSGIGPR AKLERLGIPL VEDLPVGQAL MDQPHVYLQV
VTRDGGERTP AVGGKVWGRS PLATGEELDF YLGFNHYADE SVASSGHAFG VIVCACHVES
RGTMELLARH PDAEIDVALN LLQVPNDTVR LMAGIEAALR VVRQAPLIER VESVTFRDGT
PVPDDPDVLR AALQQHVEPT LHITSTAPMG AARDGLSVTN CEGMVWGVEG LRIVDASIYP
ETPSVATNPT VIMGAEYLAH KITVSEQRR
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