| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PSPA7_1181 |
|---|
| Symbol | |
|---|
| ID | 5356564 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pseudomonas aeruginosa PA7 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009656 |
|---|
| Strand | + |
|---|
| Start bp | 1182118 |
|---|
| End bp | 1183299 |
|---|
| Gene Length | 1182 bp |
|---|
| Protein Length | 393 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 640810234 |
|---|
| Product | MFS family transporter |
|---|
| Protein accession | YP_001346566 |
|---|
| Protein GI | 152985785 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2271] Sugar phosphate permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAACCGAC CTCGAACCGT TATCCGCTTC ATCAACGCCG CGCATGTCAT CGACCACATG
TTCATGCTGA TCTTCCCCGC CGCCGTGCTC GGCATGGCCG GCAGCTTCGA CCTCGACTAC
GCCGGGCTGA TCGGCCTGGC GCTGGGCGGC TTCATCGCCT TCGGCGCCTG TTCGCTGCCG
GCCGGCTGGC TGGGCGACAC CTGGAGCCGG CGCAGCATGA TGCTGCTGTT CTTCTTCGGC
ATCGGCGCCG CCGCGGTGCT CACCGGGCTG GCCGGCAGCG TACCGATGCT GGTGACCGGG
CTGACCCTGA TCGGGGTATT CGCCGCGATC TACCACCCGG TCGGCACCGC GATGCTGGTG
GCTCACGCCG AGAACCGCGG CCGCGAGATC GGCATCAACG GCATGTGGGG CAACCTCGGG
GTGGCCTTCG CCGCGCTGCT TACCGGTTTT CTCACCGCGC ACTTCGGCTG GCGCGCGGCG
TTCATCCTGC CCGGCGGGGT GGCCATCCTG CTCGGCATCG GCTTTTTCCT CTGCGTGCGC
GAGGAGCCAT CGCCGCACCT GTCGGCCAAG GCCGCGGCGC GTGGCGAGGA CAGCGAGGGC
CTGTCGATGC GCCGGGTGTT CGGCGTGCTG GCGCTGGTCA CCGCCACCGG CGGGGTGGTG
TTCAACGCCA GCACCGTGAC CTACCCGAAG CTGTTCCAGG AGCGCCTGAG CGACCTGCTG
GCGTCGCCGC AGACCCTCGG CGTGGTGGTC AGCCTGGCCT ATGCCTTCGG CGCGGTGGCG
CAACTGATCA TGGGCCGCCT GATCGATCGG CTGAACCTGA AGTTGCCGTT CGTCTTCCTC
ACCTTCTGCC AGGTGCCGCT GCTGTTGGCC CTGGCCTACG GCCACGGCAG CGCGGTGGTG
CTGTTCGGCG CGCTGTTCAT GTTCGCGGTG TTCGGCCAGG TGACGGTGAA CGACGCGATG
GTCGCCCACT TCGTCGCGCC GCAGTGGCAG GCGCGGGTCT TCGCCCTGCG CTATTTCCTG
TCGTTCGGCG CCAGTGCGGC GGCGATCCCG ATGATCGCCT TCCTCGAACC GCGGCAGGGA
CTGGTGGGGT TGTACCTGGT GCTGGCAGGC TTCGCCGCGC TGACCTTCGC CGCGGCGCTG
GTGTTTCCGC GCCCGGCGCG TAGCGCCGCG GTGGGTGCCT GA
|
|---|
| Protein sequence | MNRPRTVIRF INAAHVIDHM FMLIFPAAVL GMAGSFDLDY AGLIGLALGG FIAFGACSLP
AGWLGDTWSR RSMMLLFFFG IGAAAVLTGL AGSVPMLVTG LTLIGVFAAI YHPVGTAMLV
AHAENRGREI GINGMWGNLG VAFAALLTGF LTAHFGWRAA FILPGGVAIL LGIGFFLCVR
EEPSPHLSAK AAARGEDSEG LSMRRVFGVL ALVTATGGVV FNASTVTYPK LFQERLSDLL
ASPQTLGVVV SLAYAFGAVA QLIMGRLIDR LNLKLPFVFL TFCQVPLLLA LAYGHGSAVV
LFGALFMFAV FGQVTVNDAM VAHFVAPQWQ ARVFALRYFL SFGASAAAIP MIAFLEPRQG
LVGLYLVLAG FAALTFAAAL VFPRPARSAA VGA
|
|---|
| |